BLASTX nr result

ID: Papaver22_contig00033171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00033171
         (1196 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83390.1| hypothetical protein VITISV_041404 [Vitis vinifera]    66   2e-08
ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|2...    61   6e-07
ref|XP_002315369.1| f-box family protein [Populus trichocarpa] g...    58   4e-06

>emb|CAN83390.1| hypothetical protein VITISV_041404 [Vitis vinifera]
          Length = 322

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 17/209 (8%)
 Frame = +3

Query: 138 SCKGLVCYASHIRKRTSERKVYICNPVTGEQIQLP---VISKWVENPDAEQGIGFGYNPS 308
           SC GL+C+     K   E +  + NP+ GE + LP   V+S+W   P  ++  G G++ S
Sbjct: 55  SCHGLLCFV----KCGKEEEALVSNPLRGELLMLPESTVMSRW---PHLDR-YGLGFDSS 106

Query: 309 SKEYKXXXXXXXXXXXXTLQGGVLSKHKFSIGNQALSRPSNVLPSV-----GVFARGALH 473
            K+YK              +G  L    +++G  +  R  + +P        V+A GALH
Sbjct: 107 IKKYKIVHVFFRDFDWAK-RGYRLGAEVYTVGTTSSWREISQIPCYPLYKRAVYASGALH 165

Query: 474 WI-------ESVESMIVTFDLENERFELL--SGIPSELCDTNHVELMELGGNLCVLEVFP 626
           W+       ++++SM+++F++++E F  +     PS++  +   EL++L G L +++   
Sbjct: 166 WLVNYEFNPDNLKSMVISFNIKDEEFNSIPHQEFPSKV--SKWFELVDLRGYLGMVDFSL 223

Query: 627 SKHVTIWESSFRETRRRFVSTWCTVFRLE 713
             H+ IW+    E +      W   +R++
Sbjct: 224 GTHIEIWKLKDYEKKE-----WVREYRID 247


>ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|222845402|gb|EEE82949.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
 Frame = +3

Query: 93  ISMPSTCYL-----RTFIVGSCKGLVCYASHIRKRTSERKVYICNPVTGEQIQLPVISKW 257
           +SMP+   L     R  +VGS  GL+C +   R +   +K YICNP+TGE I        
Sbjct: 103 VSMPTKFKLPKNTFRGKVVGSSNGLLCLSEIHRMK---KKFYICNPITGEYI-------G 152

Query: 258 VENPDAEQG------IGFGYNPSSKEYKXXXXXXXXXXXXTLQGGVLSKHKFSIGNQA-- 413
           +  P  +QG      IGF YNP +++ K                G +    F++G+ +  
Sbjct: 153 IAGPKVDQGWHVFEPIGFFYNPQNQQCKILMPRVRVGYGNFPGSGQI----FTLGSNSWR 208

Query: 414 -LSRPSNVLPSVGVFARGALHWIESVESM-IVTFDLENERFELLSGIPSELCDTNHVELM 587
            +  P ++     V   G+LHWI + +   I +FD+ENE+  L   +P ++   +   L 
Sbjct: 209 NIDIPGHLHLIRAVPLNGSLHWISTRDDRHISSFDMENEQ-ALSIALPDQVV-MHTASLA 266

Query: 588 ELGGNLCVLE 617
            LG  LC+ +
Sbjct: 267 GLGNFLCIFD 276


>ref|XP_002315369.1| f-box family protein [Populus trichocarpa]
           gi|222864409|gb|EEF01540.1| f-box family protein
           [Populus trichocarpa]
          Length = 406

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 59/206 (28%), Positives = 86/206 (41%), Gaps = 14/206 (6%)
 Frame = +3

Query: 48  ERVSCLGTLTKLDQHISMPSTCYLR----TFIVGSCKGLVCYASHIRKRTSERKVYICNP 215
           E ++C G     D     PS C++       I  SC GL+  +S  R    +RK YIC P
Sbjct: 101 EFITCEGQ----DDAAPEPSLCFIEDDQGVCIQHSCNGLLLCSS-FRCHEDDRKYYICKP 155

Query: 216 VTGEQIQLPVISKWVENPDAE--QGIGFGYNPS-SKEYKXXXXXXXXXXXXTLQGGVLSK 386
            T +  QLP        P  +   GI   Y+P+ S  YK                  +  
Sbjct: 156 TTKQYHQLP-------KPGCKIVFGINIAYDPTISPHYK---------IICVCDSNAIKM 199

Query: 387 HKFSIGNQALSRPSNVLPSV-----GVFARGALHWIESVESMIVTFDLENERFEL--LSG 545
           +  +IG+  +S    V   V     GVF   ALHWI S  ++ + FD+E ER     +  
Sbjct: 200 YDSAIGSWRVSGNHQVFSHVLLFNRGVFLNRALHWI-SRGALALRFDIEQERMLTMPMPP 258

Query: 546 IPSELCDTNHVELMELGGNLCVLEVF 623
           IP    +       E GG+LC++E++
Sbjct: 259 IPEGRSERRLGYFGESGGHLCLIEIY 284


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