BLASTX nr result

ID: Papaver22_contig00033093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00033093
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD24601.1| putative non-LTR retroelement reverse transcripta...    95   7e-18
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    92   6e-17
gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo...    87   1e-15
gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japo...    87   1e-15
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    86   4e-15

>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1319

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
 Frame = -1

Query: 423  VSDLIDQDTKSWKVQVIQQIFVREDAWKILQIRIPSAAEDKLFWTLTKNGIFSVKSAYNK 244
            VS LID  T++W ++ + ++F  +D   I+  R   ++ED   W  T NG+++VKS Y +
Sbjct: 913  VSHLIDPLTRNWNLKKLTELFHEKDVQLIMHQRPLISSEDSYCWAGTNNGLYTVKSGYER 972

Query: 243  IQE------LKEGNVVPDDDTTNFWRKLWKIPTLPRVKHFLWKCLIDIVPSNERMGRNMS 82
                      KE +V P       + K+W + T+P++K F+WK L   +   +R+     
Sbjct: 973  SSRETFKNLFKEADVYPS--VNPLFDKVWSLETVPKIKVFMWKALKGALAVEDRLRSRGI 1030

Query: 81   YTGEQCSICEQSIETTRHLLWDCPFAK 1
             T + C  C++ IET  HLL+ CPFA+
Sbjct: 1031 RTADGCLFCKEEIETINHLLFQCPFAR 1057


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 6/170 (3%)
 Frame = -1

Query: 492  WI--QGKFSPPIPAVELDMDREYCLVSDLIDQDTKSWKVQVIQQIFVREDAWKILQIRIP 319
            WI  +G    P P  + ++D + C   DLID    +W ++ +QQ FV E+   +L I + 
Sbjct: 942  WILGEGAHMVPTPQADSNLDLKVC---DLIDVARGAWNIESVQQTFVEEEWELVLSIPLS 998

Query: 318  S-AAEDKLFWTLTKNGIFSVKSAY--NKIQELKEGNVVPDDDTTNFWRKLWKIPTLPRVK 148
                +D  +W  ++NGIFSV+S Y   ++  ++   +   +  T  WR++W++   P++ 
Sbjct: 999  RFLPDDHRYWWPSRNGIFSVRSCYWLGRLGPVRTWQLQHGERETELWRRVWQLQGPPKLS 1058

Query: 147  HFLWK-CLIDIVPSNERMGRNMSYTGEQCSICEQSIETTRHLLWDCPFAK 1
            HFLW+ C   +        R++S     CS+C    E+  H L+DC FA+
Sbjct: 1059 HFLWRACKGSLAVKGRLFSRHIS-VDATCSVCGDPDESINHALFDCTFAR 1107


>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
          Length = 615

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
 Frame = -1

Query: 423 VSDLIDQDTKSWKVQVIQQIFVREDAWKILQIRIPSAAEDKLFWTLTKNGIFSVKSAYNK 244
           V+DLID     W  ++I+ +F  ED  +IL I I +  ED L W     GIFSVKSAY+ 
Sbjct: 416 VTDLIDPTIGKWDKELIEGLFWEEDVKQILTIPIRAGVEDGLAWHFDNRGIFSVKSAYHV 475

Query: 243 IQELKEGNVVPDDDTTN---------FWRKLWKIPTLPRVKHFLWKCLIDIVPSNERMGR 91
           +++ +  +    D  ++          W+++WK+P LP+VKHF+W    + +P    + +
Sbjct: 476 LEDERRRHKPKQDGASSSGQTNMEKLCWQQIWKLPYLPKVKHFIWHLAHNSLPFRMSIQK 535

Query: 90  NMSYTGEQCSICEQSIETTRHLLWDC 13
                  +C +C +  E   H    C
Sbjct: 536 RGMQIDTRCPVCHRQNEDGGHYFLKC 561


>gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japonica Group]
          Length = 613

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
 Frame = -1

Query: 423 VSDLIDQDTKSWKVQVIQQIFVREDAWKILQIRIPSAAEDKLFWTLTKNGIFSVKSAYNK 244
           V+DLI+  T  W  ++IQ IF  ED   IL I + +   D   W     GIFSVKSAY+ 
Sbjct: 204 VADLINPITGEWDRELIQDIFWEEDVKNILAIPVHNGYSDVAAWHFDPRGIFSVKSAYHT 263

Query: 243 IQELKEGNVVPDDDTTNF---------WRKLWKIPTLPRVKHFLWKCLIDIVPSNERMGR 91
           ++  ++   +     ++          W KLW++  LP+VKHFLW+   + +P  + + +
Sbjct: 264 LEYQRDRQAIRQTGESSSGKTSSAALQWEKLWRLNHLPKVKHFLWRLAHNSLPLRQNISK 323

Query: 90  NMSYTGEQCSICEQSIETTRHLLWDCPFAK 1
                  +C +C +  E   H  + C F K
Sbjct: 324 RGMEIDTRCPVCLRLDENGGHCFFKCKFVK 353


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
 Frame = -1

Query: 423  VSDLIDQDTKSWKVQVIQQIFVREDAWKILQIRIPSAAEDKLFWTLTKNGIFSVKSAYNK 244
            VS LID  +++W + +++ +F  +D   IL+ R     ED   W  + NG++SVK+ Y  
Sbjct: 960  VSQLIDPTSRNWNLNMLRDLFPWKDVEIILKQRPLFFKEDSFCWLHSHNGLYSVKTGYEF 1019

Query: 243  IQE------LKEGNVVPDDDTTNFWRKLWKIPTLPRVKHFLWKCLIDIVPSNERMGRNMS 82
            + +       +E  V P     + + K+W + T P+++ FLWK L   +P  +R+     
Sbjct: 1020 LSKQVHHRLYQEAKVKPS--VNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGI 1077

Query: 81   YTGEQCSICEQSIETTRHLLWDCPFAK 1
             + + C +C+   ET  H+L++CP A+
Sbjct: 1078 RSDDGCLMCDTENETINHILFECPLAR 1104


Top