BLASTX nr result

ID: Papaver22_contig00033019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00033019
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]    72   6e-16
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    64   1e-15
gb|ABK28199.1| unknown [Arabidopsis thaliana]                          70   5e-15
gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thali...    70   5e-15
gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thali...    70   5e-15

>emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]
          Length = 395

 Score = 71.6 bits (174), Expect(2) = 6e-16
 Identities = 47/120 (39%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
 Frame = +2

Query: 41  RSTAYIGWSFPRPGF*KLNTDGAANLDHG-AGAGGVIRDDTGTFVAAFAKHIFKNGSNMA 217
           R   Y  W  P  G+ KLN DG+     G AG GG++RD  G+F+AAFA  +  + S MA
Sbjct: 220 RPLRYFSWHRPGAGWVKLNFDGSFKGRTGRAGGGGLLRDAQGSFIAAFATPLDTSNSLMA 279

Query: 218 EIWAIKEGLLLALSLNITRLEVVSDSTYVIDLVN-RRCGTPCYFVNLLRDINKLASFFCE 394
           EI A++ GL LAL LN+ R+ +  DS   I++++ +R  T     +L+  I +L   F E
Sbjct: 280 EIGALEGGLRLALKLNVERILIEGDSKITIEMLSGKREXTXEEEKSLMTHIRELLQGFQE 339



 Score = 37.7 bits (86), Expect(2) = 6e-16
 Identities = 21/56 (37%), Positives = 24/56 (42%)
 Frame = +3

Query: 387 FVNVSFSQNYREGNFVADTLAKFAVNPHINQYWLHTPPSFILSFLLDDVMGRAFPR 554
           F  V+    +RE N  AD LA  A   H    W   PP  +L FL  D   R  PR
Sbjct: 337 FQEVTARHEFREANRPADHLANIATQAHEPMEWHPHPPHSLLPFLHHDQFSRVVPR 392


>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 63.5 bits (153), Expect(2) = 1e-15
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
 Frame = +2

Query: 38  SRSTAYIGWSFPRPGF*KLNTDGAANLDHG-AGAGGVIRDDTGTFVAAFAKHIFKNGSNM 214
           SR    + W  P  G+ KLNTDGA+  + G A AGGV+RD  G ++  FA +I    + +
Sbjct: 145 SRVERLVSWVSPEDGWVKLNTDGASRGNPGFATAGGVLRDHNGAWIGGFAVNIGVCSAPL 204

Query: 215 AEIWAIKEGLLLALSLNITRLEVVSDSTYVI 307
           AE+W +  GL +A      R+E+  DS  V+
Sbjct: 205 AELWGVYYGLFIAWGRGARRVELEVDSKMVV 235



 Score = 45.1 bits (105), Expect(2) = 1e-15
 Identities = 23/57 (40%), Positives = 34/57 (59%)
 Frame = +3

Query: 396 VSFSQNYREGNFVADTLAKFAVNPHINQYWLHTPPSFILSFLLDDVMGRAFPRDVRL 566
           V  S  YRE N +AD LA +A +  +  + L + P  + S LLDDV G ++PR V++
Sbjct: 265 VRISHVYREANRLADGLANYAFSLSLGLHLLESRPDVVSSILLDDVAGVSYPRHVQV 321


>gb|ABK28199.1| unknown [Arabidopsis thaliana]
          Length = 315

 Score = 70.1 bits (170), Expect(2) = 5e-15
 Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
 Frame = +2

Query: 17  TFSVSLNSRSTAYIGWSFPRPGF*KLNTDGAANLDHG-AGAGGVIRDDTGTFVAAFAKHI 193
           T S     R    I WS P  G+ KLNTDGA+  + G A AGGV+RD+ G +   FA +I
Sbjct: 131 TLSGGHGERVERLIAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNI 190

Query: 194 FKNGSNMAEIWAIKEGLLLALSLNITRLEVVSDSTYVI 307
               + +AE+W +  GL +A    +TRLE+  DS  V+
Sbjct: 191 GVCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEIVV 228



 Score = 36.2 bits (82), Expect(2) = 5e-15
 Identities = 21/57 (36%), Positives = 28/57 (49%)
 Frame = +3

Query: 396 VSFSQNYREGNFVADTLAKFAVNPHINQYWLHTPPSFILSFLLDDVMGRAFPRDVRL 566
           V  S  YRE N +AD LA +A +  +  + L   P  +   LLDD  G    R VR+
Sbjct: 258 VRISHVYREANRLADGLANYAFSLPLGFHSLSLVPDSLRFILLDDTSGATVSRQVRM 314


>gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thaliana]
          Length = 314

 Score = 70.1 bits (170), Expect(2) = 5e-15
 Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
 Frame = +2

Query: 17  TFSVSLNSRSTAYIGWSFPRPGF*KLNTDGAANLDHG-AGAGGVIRDDTGTFVAAFAKHI 193
           T S     R    I WS P  G+ KLNTDGA+  + G A AGGV+RD+ G +   FA +I
Sbjct: 131 TLSGGHGERVERLIAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNI 190

Query: 194 FKNGSNMAEIWAIKEGLLLALSLNITRLEVVSDSTYVI 307
               + +AE+W +  GL +A    +TRLE+  DS  V+
Sbjct: 191 GVCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEIVV 228



 Score = 36.2 bits (82), Expect(2) = 5e-15
 Identities = 21/57 (36%), Positives = 28/57 (49%)
 Frame = +3

Query: 396 VSFSQNYREGNFVADTLAKFAVNPHINQYWLHTPPSFILSFLLDDVMGRAFPRDVRL 566
           V  S  YRE N +AD LA +A +  +  + L   P  +   LLDD  G    R VR+
Sbjct: 258 VRISHVYREANRLADGLANYAFSLPLGFHSLSLVPDSLRFILLDDTSGATVSRQVRM 314


>gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|20197456|gb|AAM15081.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 314

 Score = 70.1 bits (170), Expect(2) = 5e-15
 Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
 Frame = +2

Query: 17  TFSVSLNSRSTAYIGWSFPRPGF*KLNTDGAANLDHG-AGAGGVIRDDTGTFVAAFAKHI 193
           T S     R    I WS P  G+ KLNTDGA+  + G A AGGV+RD+ G +   FA +I
Sbjct: 131 TLSGGHGERVERLIAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNI 190

Query: 194 FKNGSNMAEIWAIKEGLLLALSLNITRLEVVSDSTYVI 307
               + +AE+W +  GL +A    +TRLE+  DS  V+
Sbjct: 191 GVCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEIVV 228



 Score = 36.2 bits (82), Expect(2) = 5e-15
 Identities = 21/57 (36%), Positives = 28/57 (49%)
 Frame = +3

Query: 396 VSFSQNYREGNFVADTLAKFAVNPHINQYWLHTPPSFILSFLLDDVMGRAFPRDVRL 566
           V  S  YRE N +AD LA +A +  +  + L   P  +   LLDD  G    R VR+
Sbjct: 258 VRISHVYREANRLADGLANYAFSLPLGFHSLSLVPDSLRFILLDDTSGATVSRQVRM 314


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