BLASTX nr result

ID: Papaver22_contig00032894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00032894
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus ...    73   2e-11
gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thal...    67   2e-09
ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thalian...    67   2e-09
emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera]    66   3e-09
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    65   7e-09

>ref|XP_002520466.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540308|gb|EEF41879.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 7/165 (4%)
 Frame = +3

Query: 3   ISNPTFIQSHLNVTVK-KNNPSLMLAGYEDXXXXXXXXXXXXYDSLSEFDDIDVNEMDYP 179
           I NP FI++HL+ +++ K    L+L  ++             Y +      ID  ++  P
Sbjct: 35  IDNPDFIKAHLDTSIQTKPRKKLILLRHQSNGVAEF------YAADHNGGLIDPIKLKSP 88

Query: 180 FKSSASKIKLVGSYNGLVCIMIDNDFYCIWNPATNEYKRLPETPN-----VDNYEEEDIE 344
            KS ++  ++VGS N LV +M + D   +WNP T +YK LPE           Y + D+ 
Sbjct: 89  IKSKSNGTRIVGSCNSLVLLMQNTDKLLLWNPFTTQYKILPEPQREKATFTSQYLQYDV- 147

Query: 345 TYGLGYDCKTDDYK-XXXXXXXXXXXXXXXYTLGSNSWDSIRTVP 476
            +GLGYD  +DDYK                Y+L SNSW  +   P
Sbjct: 148 -FGLGYDAASDDYKVVRIQKCRSKKDGVGIYSLRSNSWTRLHDFP 191


>gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thaliana]
           gi|21536665|gb|AAM60997.1| unknown [Arabidopsis
           thaliana]
          Length = 416

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
 Frame = +3

Query: 201 IKLVGSYNGLVCIMIDNDFYCIWNPATNEYKRLPET--PNVDNYEEEDIETYGLGYDCKT 374
           +++VGS NGLVCI        ++NP T + KRLPE   P    YE ++ +TYG G+D  T
Sbjct: 152 VEIVGSSNGLVCISPGEGAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQTYGFGFDGLT 211

Query: 375 DDYK-XXXXXXXXXXXXXXXYTLGSNSWDSIRTVPYRFYGGS 497
           DDYK                Y+L ++SW  I  + Y    GS
Sbjct: 212 DDYKLVKLVATSEDILDASVYSLKADSWRRICNLNYEHNDGS 253


>ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|75151183|sp|Q8GXC7.1|FBK50_ARATH RecName:
           Full=F-box/kelch-repeat protein At3g06240
           gi|26451648|dbj|BAC42921.1| unknown protein [Arabidopsis
           thaliana] gi|29824145|gb|AAP04033.1| putative F-box
           protein family [Arabidopsis thaliana]
           gi|332640843|gb|AEE74364.1| F-box/kelch-repeat protein
           [Arabidopsis thaliana]
          Length = 427

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
 Frame = +3

Query: 201 IKLVGSYNGLVCIMIDNDFYCIWNPATNEYKRLPET--PNVDNYEEEDIETYGLGYDCKT 374
           +++VGS NGLVCI        ++NP T + KRLPE   P    YE ++ +TYG G+D  T
Sbjct: 163 VEIVGSSNGLVCISPGEGAVFLYNPTTGDSKRLPENFRPKSVEYERDNFQTYGFGFDGLT 222

Query: 375 DDYK-XXXXXXXXXXXXXXXYTLGSNSWDSIRTVPYRFYGGS 497
           DDYK                Y+L ++SW  I  + Y    GS
Sbjct: 223 DDYKLVKLVATSEDILDASVYSLKADSWRRICNLNYEHNDGS 264


>emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera]
          Length = 265

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
 Frame = +3

Query: 171 DYPFKSSASKIKLVGSYNGLVCIMI---DNDFYCIWNPATNEYKRLPETPNVDNYEEEDI 341
           DYP +      ++VG YNGLVCI I   + D   +WNP+  E KRLP  P    +    +
Sbjct: 89  DYPGRDLGVINEIVGCYNGLVCISIRDMEKDTIFVWNPSIKESKRLPSKPFEQLFY---L 145

Query: 342 ETYGLGYDCKTDDYK----XXXXXXXXXXXXXXXYTLGSNSWDSIRTVPY 479
            +Y  GYD  TDDYK                   ++L SN+W  IR+ PY
Sbjct: 146 VSYAFGYDSITDDYKVVRLVCCSINDSYEYHVEVFSLRSNAWRKIRSFPY 195


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
 Frame = +3

Query: 159 VNEMDYPFKSSASKIKLVGSYNGLVCIMIDNDFYCIWNPATNEYKRLPETPNV--DNYEE 332
           V E+D+P    +++IK++GS NGL+CI    D    WNP   +++ +P  P +  +  E 
Sbjct: 72  VKELDHPLMCYSNRIKVLGSCNGLLCICNIADDIAFWNPTIRKHRIIPSEPLIRKETNEN 131

Query: 333 EDIET------YGLGYDCKTDDYK------XXXXXXXXXXXXXXXYTLGSNSWDSIRTVP 476
             I T      YG GYD  TDDYK                     YT+ ++ W ++ ++P
Sbjct: 132 NTITTLLAAHVYGFGYDSATDDYKLVSISYFVDLHNRSFDSHVKIYTMRTDVWKTLPSMP 191

Query: 477 Y 479
           Y
Sbjct: 192 Y 192


Top