BLASTX nr result

ID: Papaver22_contig00032862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00032862
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309058.1| predicted protein [Populus trichocarpa] gi|2...   164   1e-38
ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-...   163   2e-38
ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-...   161   1e-37
emb|CBI30553.3| unnamed protein product [Vitis vinifera]              161   1e-37
ref|XP_003623126.1| E3 ubiquitin-protein ligase ubr1 [Medicago t...   160   2e-37

>ref|XP_002309058.1| predicted protein [Populus trichocarpa] gi|222855034|gb|EEE92581.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score =  164 bits (415), Expect = 1e-38
 Identities = 85/131 (64%), Positives = 94/131 (71%), Gaps = 3/131 (2%)
 Frame = -2

Query: 606 YIKQNCLVCGFAQEDPALCLLCGLVFSPGMVTCCRNE-YQAHAMACGAGNGVYLLIRRNG 430
           YIKQ C+ C    +DPALCLLCG V S    +CCR    Q HAMACGAG GV+LLI+R  
Sbjct: 166 YIKQKCVGCKTLLDDPALCLLCGRVCSLNWKSCCRESGCQTHAMACGAGTGVFLLIKRTT 225

Query: 429 ILLHRSASHAPWPSPYLDAFGEE--DEGLQRGKPLYLNVERYATLTNMVASHGLDQSSDV 256
           ILL R A  APWPSPYLDAFGEE  D  +QRGKPLYLN ERYA LT MVASHGLD+SS V
Sbjct: 226 ILLQRCARQAPWPSPYLDAFGEEASDIQIQRGKPLYLNEERYAALTYMVASHGLDRSSKV 285

Query: 255 FRETTFDGLFM 223
             +TT   LF+
Sbjct: 286 LGQTTIGSLFL 296


>ref|XP_003530206.1| PREDICTED: E3 ubiquitin-protein ligase UBR3-like [Glycine max]
          Length = 2037

 Score =  163 bits (413), Expect = 2e-38
 Identities = 81/128 (63%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
 Frame = -2

Query: 603  IKQNCLVCGFAQEDPALCLLCGLVFSPGMVTCCRNE-YQAHAMACGAGNGVYLLIRRNGI 427
            IKQ C  C    +DPALCLLCG + SP   +CCR    Q HA+ CGAG GV+LLI+R  I
Sbjct: 1909 IKQRCPECKSVLDDPALCLLCGRLCSPSWKSCCRESGCQTHAVTCGAGTGVFLLIKRTTI 1968

Query: 426  LLHRSASHAPWPSPYLDAFGEEDEGLQRGKPLYLNVERYATLTNMVASHGLDQSSDVFRE 247
            LL RSA  APWPSPYLDAFGEED  + RGKPLYLN ERYA LT MVASHGLD+SS V  +
Sbjct: 1969 LLQRSARQAPWPSPYLDAFGEEDFEMHRGKPLYLNEERYAALTYMVASHGLDRSSRVLGQ 2028

Query: 246  TTFDGLFM 223
            TT    F+
Sbjct: 2029 TTIGSFFL 2036


>ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-like [Vitis vinifera]
          Length = 2048

 Score =  161 bits (407), Expect = 1e-37
 Identities = 82/129 (63%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
 Frame = -2

Query: 606  YIKQNCLVCGFAQEDPALCLLCGLVFSPGMVTCCR-NEYQAHAMACGAGNGVYLLIRRNG 430
            YIKQ C  C     DP LCLLCG + SP    CCR N  QAHAM CGAG GV LLI++  
Sbjct: 1919 YIKQQCPDCKTVLNDPVLCLLCGRLCSPSWKPCCRENGCQAHAMTCGAGTGVSLLIKKTT 1978

Query: 429  ILLHRSASHAPWPSPYLDAFGEEDEGLQRGKPLYLNVERYATLTNMVASHGLDQSSDVFR 250
            ILL RSA  APWPS YLDAFGEED  + RGKPLYLN ERYA L++MVASHGLD+SS V  
Sbjct: 1979 ILLQRSARQAPWPSLYLDAFGEEDIEMHRGKPLYLNKERYAALSHMVASHGLDRSSKVLG 2038

Query: 249  ETTFDGLFM 223
            ETT    F+
Sbjct: 2039 ETTIAAFFL 2047


>emb|CBI30553.3| unnamed protein product [Vitis vinifera]
          Length = 1254

 Score =  161 bits (407), Expect = 1e-37
 Identities = 82/129 (63%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
 Frame = -2

Query: 606  YIKQNCLVCGFAQEDPALCLLCGLVFSPGMVTCCR-NEYQAHAMACGAGNGVYLLIRRNG 430
            YIKQ C  C     DP LCLLCG + SP    CCR N  QAHAM CGAG GV LLI++  
Sbjct: 1125 YIKQQCPDCKTVLNDPVLCLLCGRLCSPSWKPCCRENGCQAHAMTCGAGTGVSLLIKKTT 1184

Query: 429  ILLHRSASHAPWPSPYLDAFGEEDEGLQRGKPLYLNVERYATLTNMVASHGLDQSSDVFR 250
            ILL RSA  APWPS YLDAFGEED  + RGKPLYLN ERYA L++MVASHGLD+SS V  
Sbjct: 1185 ILLQRSARQAPWPSLYLDAFGEEDIEMHRGKPLYLNKERYAALSHMVASHGLDRSSKVLG 1244

Query: 249  ETTFDGLFM 223
            ETT    F+
Sbjct: 1245 ETTIAAFFL 1253


>ref|XP_003623126.1| E3 ubiquitin-protein ligase ubr1 [Medicago truncatula]
            gi|355498141|gb|AES79344.1| E3 ubiquitin-protein ligase
            ubr1 [Medicago truncatula]
          Length = 2105

 Score =  160 bits (405), Expect = 2e-37
 Identities = 78/128 (60%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
 Frame = -2

Query: 603  IKQNCLVCGFAQEDPALCLLCGLVFSPGMVTCCRNE-YQAHAMACGAGNGVYLLIRRNGI 427
            +KQ C  C    +DPALCLLCG + SP   +CCR    Q H++ CGAG GV+LL RR  I
Sbjct: 1888 VKQRCPECKGRLDDPALCLLCGRLCSPSWKSCCRESGCQTHSVTCGAGTGVFLLTRRTTI 1947

Query: 426  LLHRSASHAPWPSPYLDAFGEEDEGLQRGKPLYLNVERYATLTNMVASHGLDQSSDVFRE 247
            LL RSA  APWPSPYLDAFGEED  + RGKPL+LN+ERYA LT MVASHGLD+SS V  +
Sbjct: 1948 LLQRSARQAPWPSPYLDAFGEEDFEMNRGKPLFLNMERYAALTYMVASHGLDRSSKVLGQ 2007

Query: 246  TTFDGLFM 223
            TT    F+
Sbjct: 2008 TTIGSFFL 2015


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