BLASTX nr result

ID: Papaver22_contig00032830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00032830
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336506.1| hypothetical protein POPTRDRAFT_592433 [Popu...    72   2e-14
ref|XP_002305447.1| chromatin remodeling complex subunit [Populu...    72   5e-11
ref|XP_003571619.1| PREDICTED: helicase ARIP4-like [Brachypodium...    70   1e-10
dbj|BAK00786.1| predicted protein [Hordeum vulgare subsp. vulgare]     70   2e-10
emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]    64   3e-10

>ref|XP_002336506.1| hypothetical protein POPTRDRAFT_592433 [Populus trichocarpa]
           gi|222835795|gb|EEE74230.1| hypothetical protein
           POPTRDRAFT_592433 [Populus trichocarpa]
          Length = 387

 Score = 72.0 bits (175), Expect(2) = 2e-14
 Identities = 55/128 (42%), Positives = 68/128 (53%), Gaps = 23/128 (17%)
 Frame = -1

Query: 337 FKRSSMKSSVCVRPHLKEYSES*TTEDKGHIN-----------EAIFFF*LYCCFVN--- 200
           FKRSS+ S+V + P L  +SE+    D    N           +A FF  +     +   
Sbjct: 105 FKRSSVGSAVYLHPKLHSFSENSAVTDDMMDNLLETLDVRDGAKAKFFLNILSLCKSAGE 164

Query: 199 --------LLPLKFLERLVVKTRG*SLGKEVVVISAASS*EQREIS-GRFNNSKDAKVCF 47
                   L PLKFLERLV+K +G  LGK++ VIS  SS + RE S  RFNNS DAKV F
Sbjct: 165 KLLVFSQYLTPLKFLERLVMKVKGWILGKDIFVISGESSSDHREWSMDRFNNSIDAKVFF 224

Query: 46  VSIKACWE 23
            SIKAC E
Sbjct: 225 GSIKACGE 232



 Score = 31.6 bits (70), Expect(2) = 2e-14
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = -2

Query: 408 DLTVLLTFNSKQKHAVEKMKK 346
           D TV+L  +SKQKH V+K+KK
Sbjct: 80  DFTVVLNLSSKQKHEVQKLKK 100


>ref|XP_002305447.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222848411|gb|EEE85958.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 630

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 54/128 (42%), Positives = 66/128 (51%), Gaps = 23/128 (17%)
 Frame = -1

Query: 337 FKRSSMKSSVCVRPHLKEYSES*TTED------------KGHINEAIFFF*LYCC----- 209
           FKRSS+ S+V + P L  +S++    D            +  +    F   L  C     
Sbjct: 394 FKRSSVGSAVYLHPKLNSFSKNSAITDDMMDDLLETVDVRDGVKAKFFLNILSLCESAGE 453

Query: 208 -----FVNLLPLKFLERLVVKTRG*SLGKEVVVISAASS*EQREIS-GRFNNSKDAKVCF 47
                   L PLKFLERLV+K +G  LGKE+ VIS  SS + RE S  RFNNS DAKV F
Sbjct: 454 KLLVFSQYLTPLKFLERLVMKVKGWILGKEIFVISGESSSDHREWSMERFNNSMDAKVFF 513

Query: 46  VSIKACWE 23
            SIKAC E
Sbjct: 514 GSIKACGE 521


>ref|XP_003571619.1| PREDICTED: helicase ARIP4-like [Brachypodium distachyon]
          Length = 984

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 53/139 (38%), Positives = 72/139 (51%), Gaps = 29/139 (20%)
 Frame = -1

Query: 352  EKINTFKRSSMKSSVCVRPHLKEYSES*TTEDKGHINEAI-----------------FFF 224
            E    FKRS++ +++ + P L E SE   T+   ++ +A                  FF 
Sbjct: 736  EAYEKFKRSAVGTALYMHPCLSEMSEGDATDRANNLTDAAVDSMVQSINVRDGVKASFFI 795

Query: 223  *LY----CCFVNLL-------PLKFLERLVVKTRG*SLGKEVVVISAASS*EQREIS-GR 80
             +     C    LL       P+KFLERL+VKT G  +GKE+ VIS  +S E RE++  +
Sbjct: 796  NILRLASCAGEKLLAFSQYILPMKFLERLLVKTWGWHVGKEIFVISGDTSPEDRELAMDQ 855

Query: 79   FNNSKDAKVCFVSIKACWE 23
            FNNS DAKV F SIKAC E
Sbjct: 856  FNNSADAKVLFGSIKACGE 874


>dbj|BAK00786.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 949

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/60 (60%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
 Frame = -1

Query: 199 LLPLKFLERLVVKTRG*SLGKEVVVISAASS*EQREI-SGRFNNSKDAKVCFVSIKACWE 23
           +LP+KFLERL+VKTRG ++GKE+ VI+  +S E+RE+ + +FNNS DAKV F SI+AC E
Sbjct: 780 ILPMKFLERLLVKTRGWNVGKEIFVINGDTSQEERELATDQFNNSADAKVLFGSIRACGE 839


>emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]
          Length = 1187

 Score = 64.3 bits (155), Expect(3) = 3e-10
 Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = -1

Query: 199  LLPLKFLERLVVKTRG*SLGKEVVVISAASS*EQREIS-GRFNNSKDAKVCFVSIKACWE 23
            LLPL+FLE+L +K +G S GKE+  IS  SS EQRE S  RFN S DA+V F SIKAC E
Sbjct: 961  LLPLRFLEKLTMKVKGWSPGKEIFAISGESSSEQREWSMERFNTSPDARVFFGSIKACGE 1020



 Score = 22.7 bits (47), Expect(3) = 3e-10
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
 Frame = -3

Query: 341  YFQEKFHEKLS-----LCSPSLERILRELNHRRQRTH*RSHFFFLTILLLCESA 195
            YF EK     S      C   ++ IL +L+ R          FFL +L LC+S+
Sbjct: 901  YFAEKLAANESKTDEMTCQKKMDEILEQLDVRDGV----KAKFFLNVLALCQSS 950



 Score = 21.6 bits (44), Expect(3) = 3e-10
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 408 DLTVLLTFNSKQKHAVEKMKK 346
           D TVLL  +++QK  V  + K
Sbjct: 859 DFTVLLNLSARQKKEVGNLNK 879


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