BLASTX nr result

ID: Papaver22_contig00032823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00032823
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...    74   1e-11
ref|XP_003616374.1| hypothetical protein MTR_5g079490 [Medicago ...    60   2e-07
ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 54/142 (38%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
 Frame = -2

Query: 432 FDCKTYTGPVGRSKKEAERLAARVAICSILGTSDLGIYLSKIIKSKSTLFEAPLLFEEPQ 253
           F+  TYTG  GR+KKEAE+LAAR  I SILG S  G  LS+IIKSK  L+ A    ++P 
Sbjct: 144 FNGVTYTGDAGRNKKEAEQLAARTVILSILGNSGSGTLLSEIIKSKVKLYAALHRVKDPS 203

Query: 252 IIHD---TCRATVAIPGSNCRGIGMKRKASQTLAEHVTAPLA-----------PSHEIGN 115
            IH        T  IP    + + +     Q L   V+ PL+           P HE   
Sbjct: 204 YIHTGILPIGLTSGIPPCKGKEVEVAPGTDQLLPTAVSVPLSGQLVHVPVTHPPVHE--- 260

Query: 114 MATLLNQPKPSVESHISEDPCS 49
               L +PKP+V S +   P S
Sbjct: 261 ----LEKPKPNVSSEVIAPPIS 278


>ref|XP_003616374.1| hypothetical protein MTR_5g079490 [Medicago truncatula]
           gi|355517709|gb|AES99332.1| hypothetical protein
           MTR_5g079490 [Medicago truncatula]
          Length = 357

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/69 (43%), Positives = 46/69 (66%)
 Frame = -2

Query: 420 TYTGPVGRSKKEAERLAARVAICSILGTSDLGIYLSKIIKSKSTLFEAPLLFEEPQIIHD 241
           +YTG   R KK+A  LAAR AI SILG S+ G+ L++IIK+K+ LF++     +P+ +  
Sbjct: 153 SYTGDAARRKKDAVELAARAAILSILGNSNSGVLLAQIIKTKAKLFDS----TKPKALQP 208

Query: 240 TCRATVAIP 214
           TC + + +P
Sbjct: 209 TCDSVLVLP 217


>ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = -2

Query: 432 FDCKTYTGPVGRSKKEAERLAARVAICSILGTSDLGIYLSKIIKSKSTLFEA 277
           FD  +YTG  GR+KKEAE+LAAR  I S++G S     L +IIKSKS L+ A
Sbjct: 261 FDGVSYTGDAGRNKKEAEQLAARAVILSLIGNSGSSKILYEIIKSKSKLYAA 312


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