BLASTX nr result

ID: Papaver22_contig00032700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00032700
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    75   6e-12
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    70   2e-10
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    70   2e-10
ref|XP_002489257.1| hypothetical protein SORBIDRAFT_0011s003210 ...    65   4e-09
dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like ...    65   6e-09

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
 Frame = -2

Query: 378 VLAWNCQGLGKSSTQYHLQKLIFEHLPDILFLQETKNHETTINPIIKNLKFTNMVIMNPT 199
           +L+WNC+G+G  S    L++L+    P I+FL ETK     +  + K LK+ +MV ++  
Sbjct: 4   ILSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCE 63

Query: 198 GVI-GTAGGIVLAWSSKIDVQVLHTSDSQIDTLVTCKKSKKSWMFSGVYDCP 46
           G      GG+ + W S+I VQV+  S + ID +V  ++++  W F+G+Y  P
Sbjct: 64  GECRKRRGGLAMLWRSEIKVQVMSMSSNHID-IVVGEEAQGEWRFTGIYGYP 114


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/127 (27%), Positives = 69/127 (54%)
 Frame = -2

Query: 384 LSVLAWNCQGLGKSSTQYHLQKLIFEHLPDILFLQETKNHETTINPIIKNLKFTNMVIMN 205
           + +L+WNCQG+G + T  HL+++   + P+++FL ETK     +  ++ +L F ++  + 
Sbjct: 1   MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60

Query: 204 PTGVIGTAGGIVLAWSSKIDVQVLHTSDSQIDTLVTCKKSKKSWMFSGVYDCPYKIKKIL 25
           P   IG +GG+ L W   + ++VL +    ID L+  +   K +  + +Y  P + ++  
Sbjct: 61  P---IGKSGGLALMWKDSVQIKVLQSDKRLIDALLIWQ--DKEFYLTCIYGEPVQAER-- 113

Query: 24  DVLGSIW 4
              G +W
Sbjct: 114 ---GELW 117


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
 Frame = -2

Query: 378 VLAWNCQGLGKSSTQYHLQKLIFEHLPDILFLQETKNHETTINPIIKNLKFTNMVIMNPT 199
           V++WNCQGL    T  +L+++  +H PDILFL ETKN +  +  +   L +  +  + P 
Sbjct: 2   VISWNCQGLRNPWTIRYLKEMKKDHFPDILFLMETKNSQDFVYKVFCWLGYDFIHTVEPE 61

Query: 198 GVIGTAGGIVLAWSSKIDVQVLHTSDSQIDTLVTCKKSKKSWMFSGVYDCP--YKIKKIL 25
              G +GG+ + W S ++++ L+   + +D  V+ +   K W  S VY  P  +   K+ 
Sbjct: 62  ---GRSGGLAIFWKSHLEIEFLYADKNLMDLQVSSR--NKVWFISCVYGLPVTHMRPKLW 116

Query: 24  DVLGSIWL 1
           + L SI L
Sbjct: 117 EHLNSIGL 124


>ref|XP_002489257.1| hypothetical protein SORBIDRAFT_0011s003210 [Sorghum bicolor]
           gi|241947006|gb|EES20151.1| hypothetical protein
           SORBIDRAFT_0011s003210 [Sorghum bicolor]
          Length = 821

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
 Frame = -2

Query: 384 LSVLAWNCQGLGKSSTQYHLQKLIFEHLPDILFLQETKNHETTINPIIKNLKFTNMVIMN 205
           ++VL+ NC+G G+      + +L+ E  P ++FL ET+  E     + + L F N +++ 
Sbjct: 76  MNVLSLNCRGCGRPEAVQEIHQLVVEKKPAVVFLMETRMGEEKALGLARRLGFQNAIVVK 135

Query: 204 PTGVIGTAGGIVLAWSSKIDVQVLHTSDSQIDTLVTCKKSKKS-WMFSGVYDCP 46
             G+   +GG++L W   + V  L  S S ID +++C   K S W  +G Y  P
Sbjct: 136 SEGL---SGGLMLMWHGNVMVAELTKSRSHIDVILSCDHLKISHWRLTGFYGEP 186


>dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1197

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/124 (29%), Positives = 69/124 (55%)
 Frame = -2

Query: 375 LAWNCQGLGKSSTQYHLQKLIFEHLPDILFLQETKNHETTINPIIKNLKFTNMVIMNPTG 196
           ++WNCQG+G   T   +++++ +  PD++FL ET N +  +   +  LK  N  +++P+G
Sbjct: 1   MSWNCQGIGNPKTVRRVREILKKLSPDVIFLMETMNQDEVVLKKLDFLKRYNHFLVSPSG 60

Query: 195 VIGTAGGIVLAWSSKIDVQVLHTSDSQIDTLVTCKKSKKSWMFSGVYDCPYKIKKILDVL 16
                GG+ L W   +++ ++ + D+ ID  V+ K+   S++ + VY  P + KK     
Sbjct: 61  --QGKGGLALFWKHDVEMAIVSSCDNFIDARVSFKRI--SFLATYVYGEPEQSKK----- 111

Query: 15  GSIW 4
           G+ W
Sbjct: 112 GATW 115


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