BLASTX nr result

ID: Papaver22_contig00032678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00032678
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66932.1| hypothetical protein VITISV_030313 [Vitis vinifera]    62   6e-08
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc...    59   5e-07
emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis ...    46   1e-06
ref|NP_001041883.1| Os01g0123000 [Oryza sativa Japonica Group] g...    57   2e-06
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa...    57   3e-06

>emb|CAN66932.1| hypothetical protein VITISV_030313 [Vitis vinifera]
          Length = 414

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/77 (41%), Positives = 46/77 (59%)
 Frame = +1

Query: 349 CQIFKKKGLLGDVCWLRYKPSTKQTKPPAAYIALPNGAEGNTWVTDTGATHHLTSDLQNL 528
           CQ+  K G    VC  R  PS  +  P A YIA     + +TW+ ++GA+HH+TSDLQNL
Sbjct: 326 CQLCDKAGHSAKVCHSR-PPS--RFSPXANYIANDQANDSDTWIINSGASHHITSDLQNL 382

Query: 529 TIPHEYDGTEVVHVGNG 579
           ++   Y G E + +G+G
Sbjct: 383 SLQSNYGGNEDIMIGDG 399


>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 807

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/77 (36%), Positives = 40/77 (51%)
 Frame = +1

Query: 349 CQIFKKKGLLGDVCWLRYKPSTKQTKPPAAYIALPNGAEGNTWVTDTGATHHLTSDLQNL 528
           CQ+  K+G +   CW R+  +    +   A  A    A    W  D+GAT H+TS+L  L
Sbjct: 248 CQVCYKRGHVAAKCWHRFDENYVPDERHVAAAAQAAYAVDTNWYIDSGATDHITSELDKL 307

Query: 529 TIPHEYDGTEVVHVGNG 579
           T+  +Y GTE +H  NG
Sbjct: 308 TVREKYKGTEKIHTANG 324


>emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268350|emb|CAB78643.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 1942

 Score = 46.2 bits (108), Expect(2) = 1e-06
 Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
 Frame = +1

Query: 349 CQIFKKKGLLGDVCWLRYKPSTK----QTKPPAAYIALPNGAEGNTWVTDTGATHHLTSD 516
           CQI  K G     CW R+  S +        PA  I       G+ WVTD+ AT H+T+ 
Sbjct: 250 CQICGKHGHHALNCWHRFDNSYQLDVLPQALPATQITDITDHSGSEWVTDSAATAHITNS 309

Query: 517 LQNLTIPHEYDGTEVVHVGNG 579
            ++L     Y G++ V VGNG
Sbjct: 310 PRHLQQTKSYAGSDSVMVGNG 330



 Score = 31.2 bits (69), Expect(2) = 1e-06
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
 Frame = +3

Query: 3   LNEVKDLFAQLAAAGYTVNDDEKKQSISNGLNQAYDSIVTTLSTMEDM----TMDMFYSH 170
           L E++ ++ QLA+ G  V +  K  +  NGL + Y+ I T++    D+     +D     
Sbjct: 135 LKELQTIYEQLASVGSPVPEKMKIFAALNGLGREYEPIKTSIEGSIDIPPTPKLDEIMPR 194

Query: 171 LLNFDMRIARQHDELQQPIANVVVSKKL 254
           L  +D       D LQ   AN  VS  L
Sbjct: 195 LNGYD-------DRLQAYAANSDVSPHL 215


>ref|NP_001041883.1| Os01g0123000 [Oryza sativa Japonica Group]
           gi|113531414|dbj|BAF03797.1| Os01g0123000 [Oryza sativa
           Japonica Group] gi|215741345|dbj|BAG97840.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 360

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/81 (33%), Positives = 40/81 (49%)
 Frame = +1

Query: 349 CQIFKKKGLLGDVCWLRYKPSTKQTKPPAAYIALPNGAEGNTWVTDTGATHHLTSDLQNL 528
           CQ+  K+G +   CW R+  +    +          G + N W  DTGAT H+TS L  L
Sbjct: 275 CQVCNKRGHVASDCWHRFDETYVPDEKIGGAATHAYGIDTN-WYVDTGATDHITSQLDKL 333

Query: 529 TIPHEYDGTEVVHVGNGQAYG 591
           T   +Y GT+ +H  +G+  G
Sbjct: 334 TTKEKYQGTDQIHTASGEGQG 354


>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|31433472|gb|AAP54977.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1031

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/78 (34%), Positives = 37/78 (47%)
 Frame = +1

Query: 349 CQIFKKKGLLGDVCWLRYKPSTKQTKPPAAYIALPNGAEGNTWVTDTGATHHLTSDLQNL 528
           CQ+  K+G +   CW RY  S    +          G + N W  DTGAT H+T  L  L
Sbjct: 281 CQVCHKRGHVASDCWHRYDDSYVPDEKLGGAATYAYGVDTN-WYVDTGATDHITGQLDKL 339

Query: 529 TIPHEYDGTEVVHVGNGQ 582
           T    Y GT+ +H  +G+
Sbjct: 340 TTKERYKGTDQIHTASGE 357


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