BLASTX nr result

ID: Papaver22_contig00032593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00032593
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]    43   5e-07
ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleopro...    43   5e-07
emb|CBI30062.3| unnamed protein product [Vitis vinifera]               43   5e-07
gb|AFN53638.1| hypothetical protein [Linum usitatissimum]              42   1e-06
ref|XP_003535893.1| PREDICTED: U4/U6 small nuclear ribonucleopro...    43   6e-06

>emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]
          Length = 1088

 Score = 43.1 bits (100), Expect(2) = 5e-07
 Identities = 18/26 (69%), Positives = 23/26 (88%)
 Frame = -1

Query: 334  RAMAARDFKPTKTLSGHESKISSLDI 257
            +  +ARDFKP KTLSGHE+K++SLDI
Sbjct: 1030 KVWSARDFKPVKTLSGHEAKVTSLDI 1055



 Score = 36.6 bits (83), Expect(2) = 5e-07
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = -3

Query: 170  IATNSHDQTIKLWASRNGGKDKAMD 96
            IAT SHD+TIKLW+S    K+KAMD
Sbjct: 1062 IATVSHDRTIKLWSSAEIEKEKAMD 1086


>ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
           protein-like [Vitis vinifera]
          Length = 577

 Score = 43.1 bits (100), Expect(2) = 5e-07
 Identities = 18/26 (69%), Positives = 23/26 (88%)
 Frame = -1

Query: 334 RAMAARDFKPTKTLSGHESKISSLDI 257
           +  +ARDFKP KTLSGHE+K++SLDI
Sbjct: 519 KVWSARDFKPVKTLSGHEAKVTSLDI 544



 Score = 36.6 bits (83), Expect(2) = 5e-07
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = -3

Query: 170 IATNSHDQTIKLWASRNGGKDKAMD 96
           IAT SHD+TIKLW+S    K+KAMD
Sbjct: 551 IATVSHDRTIKLWSSAEIEKEKAMD 575


>emb|CBI30062.3| unnamed protein product [Vitis vinifera]
          Length = 385

 Score = 43.1 bits (100), Expect(2) = 5e-07
 Identities = 18/26 (69%), Positives = 23/26 (88%)
 Frame = -1

Query: 334 RAMAARDFKPTKTLSGHESKISSLDI 257
           +  +ARDFKP KTLSGHE+K++SLDI
Sbjct: 327 KVWSARDFKPVKTLSGHEAKVTSLDI 352



 Score = 36.6 bits (83), Expect(2) = 5e-07
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = -3

Query: 170 IATNSHDQTIKLWASRNGGKDKAMD 96
           IAT SHD+TIKLW+S    K+KAMD
Sbjct: 359 IATVSHDRTIKLWSSAEIEKEKAMD 383


>gb|AFN53638.1| hypothetical protein [Linum usitatissimum]
          Length = 685

 Score = 41.6 bits (96), Expect(2) = 1e-06
 Identities = 17/26 (65%), Positives = 22/26 (84%)
 Frame = -1

Query: 334 RAMAARDFKPTKTLSGHESKISSLDI 257
           +  + +DFKP KTLSGHESK++SLDI
Sbjct: 617 KVWSGKDFKPVKTLSGHESKVASLDI 642



 Score = 36.6 bits (83), Expect(2) = 1e-06
 Identities = 16/25 (64%), Positives = 21/25 (84%)
 Frame = -3

Query: 182 D*QYIATNSHDQTIKLWASRNGGKD 108
           D +YIAT SHD+TIKLW+SR+  K+
Sbjct: 645 DGRYIATVSHDRTIKLWSSRSDEKE 669


>ref|XP_003535893.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
           protein-like [Glycine max]
          Length = 570

 Score = 42.7 bits (99), Expect(2) = 6e-06
 Identities = 16/28 (57%), Positives = 24/28 (85%)
 Frame = -1

Query: 334 RAMAARDFKPTKTLSGHESKISSLDIVG 251
           +  + RDFKP KTLSGHE+K++S+D++G
Sbjct: 513 KVWSGRDFKPVKTLSGHEAKVTSVDVLG 540



 Score = 33.1 bits (74), Expect(2) = 6e-06
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = -3

Query: 188 VAD*QYIATNSHDQTIKLWASRNGGKDKAMD 96
           + D  YI T SHD+TIKLW+S N   ++AMD
Sbjct: 539 LGDGGYIVTVSHDRTIKLWSS-NTTDEQAMD 568


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