BLASTX nr result

ID: Papaver22_contig00032592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00032592
         (1245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   483   e-134
ref|XP_002333134.1| predicted protein [Populus trichocarpa] gi|2...   432   e-118
ref|XP_002331841.1| predicted protein [Populus trichocarpa] gi|2...   429   e-118
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   428   e-117
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor rpoD-...   428   e-117

>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  483 bits (1242), Expect = e-134
 Identities = 253/395 (64%), Positives = 311/395 (78%), Gaps = 3/395 (0%)
 Frame = -2

Query: 1178 RFAELHSPLKRPLILAFKTDKQKNI-LITPSEPIRIPVESPKESKRLRRSENKPAKRVKA 1002
            +F+   +PL+RPL+LAFK DK KNI L+TP EPI +P+E+ K+ K+  R  +KP+KRVKA
Sbjct: 22   KFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIETSKDHKKRLRRASKPSKRVKA 81

Query: 1001 VATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIGSXXXXXXXXXXXKAGEGNK 822
            V+TDE   C+++LD+NEAA KLEN+Y LSP +DVS+ ED+                  +K
Sbjct: 82   VSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAEDLERVVRRGRQRRKRVTLADDK 141

Query: 821  EDGREVNDFVVRNPTKKAKRLNLANRIASRRKEEMQEESVSS-QGYKDSV-EEANVNRLI 648
             + +EV+D VVR   KK KRL+L  RIA  + +  QE++V+S Q  +DS  E+ N++ L+
Sbjct: 142  AE-KEVSDNVVRIHNKKPKRLSLEKRIALSKMK--QEKAVASIQKKRDSKNEDENIDVLV 198

Query: 647  RDYSVATDHVSMDWKKMKIPPVLPASEHAWLFKLMQPMKALQESKDMLQKDIGKEPTSNE 468
            R+YS +TD VS+DWKKMKIPPVLP SEHAWLFKLMQPMK L E KD LQKD+G+EPT  E
Sbjct: 199  REYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGLLEVKDNLQKDLGREPTDGE 258

Query: 467  LAAAVNMSSVEVRRHLRVGRVARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAK 288
            LA A++MS+V+VRRH+ VG+ ARNKLIKHNLRLVLF INKYFQEFANG KFQDLCQAG K
Sbjct: 259  LAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKYFQEFANGPKFQDLCQAGVK 318

Query: 287  GLIVAIDRFEPKRKSQLSTYGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLM 108
            GLI AIDRFEPKR  +LSTYGLFWIRHAIMRSMTLSSFTRVS+GLESVRVEIQ+ KL+L+
Sbjct: 319  GLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFTRVSFGLESVRVEIQRAKLELL 378

Query: 107  FELNRIPKEEEIAEKMGISLERYHEVMRASQGVIS 3
            F+L R+P EEEI EK+GIS ERYHEVMRAS+ V+S
Sbjct: 379  FKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLS 413


>ref|XP_002333134.1| predicted protein [Populus trichocarpa] gi|222834948|gb|EEE73397.1|
            predicted protein [Populus trichocarpa]
          Length = 512

 Score =  432 bits (1110), Expect = e-118
 Identities = 236/395 (59%), Positives = 288/395 (72%), Gaps = 3/395 (0%)
 Frame = -2

Query: 1178 RFAELHSPLKRPLILAFKTDKQKNI-LITPSEPIRIPVESPKESKRLRRSENKPAKRVKA 1002
            +F+   S  KRPLI+AFK DK  N  L+ P E I +PVE+ K  KRL +S+ K + R+KA
Sbjct: 20   KFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETTKGKKRLGKSK-KSSNRLKA 78

Query: 1001 VATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIGSXXXXXXXXXXXKAGEGNK 822
            V T+ +P CTL +D+NEAA KLEN+Y LSP +D SD+ED  S           K  EG K
Sbjct: 79   VRTEVSP-CTLLVDYNEAAAKLENIYKLSPGTDTSDVED-ASGVIRRGRQRKRKISEGGK 136

Query: 821  EDGREVNDFVVRNPTKKAKRLNLANRIASRRKEEMQEESVSSQGYKDSVEEAN--VNRLI 648
            E        +VRN  KKAKRL+L  RI+ R K E  E+ VSS G +   +  N  ++ L+
Sbjct: 137  ETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNE--EKLVSSAGKRKDRKNENEKIDDLV 194

Query: 647  RDYSVATDHVSMDWKKMKIPPVLPASEHAWLFKLMQPMKALQESKDMLQKDIGKEPTSNE 468
            R+YS +TD VS+DWKKMKIPPVL +SEH WLFKLMQPMKAL + K+ LQ+++G EPT  E
Sbjct: 195  REYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQVKEHLQENLGGEPTDVE 254

Query: 467  LAAAVNMSSVEVRRHLRVGRVARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAK 288
            LA A+NM  ++VR+ + VGR ARNKLIKHNLRLVLF I KYFQ+FANG KFQD CQAG K
Sbjct: 255  LAKAINMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQDFANGTKFQDFCQAGVK 314

Query: 287  GLIVAIDRFEPKRKSQLSTYGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLM 108
            GLI AIDRFEPKR+ +LSTYGLFWIRHAI+RSMTLSSFTRVS+GLES+R EIQK KL+L 
Sbjct: 315  GLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESIRSEIQKAKLELW 374

Query: 107  FELNRIPKEEEIAEKMGISLERYHEVMRASQGVIS 3
            F+L R P E+EI EK+ IS ERYHEV RAS+ V+S
Sbjct: 375  FQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLS 409


>ref|XP_002331841.1| predicted protein [Populus trichocarpa] gi|222875079|gb|EEF12210.1|
            predicted protein [Populus trichocarpa]
          Length = 512

 Score =  429 bits (1103), Expect = e-118
 Identities = 228/395 (57%), Positives = 291/395 (73%), Gaps = 3/395 (0%)
 Frame = -2

Query: 1178 RFAELHSPLKRPLILAFKTDKQ-KNILITPSEPIRIPVESPKESKRLRRSENKPAKRVKA 1002
            +F+   S  KRPLI+AFK DK  +  L+ P E I +P+E+ KE KR  +S+ K + R+KA
Sbjct: 20   KFSTCRSTAKRPLIVAFKADKSNETALVAPHEQIPLPIETTKEKKRRGKSK-KSSDRLKA 78

Query: 1001 VATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIGSXXXXXXXXXXXKAGEGNK 822
            V T+ +P CTL +D+NEAA KLEN+Y LSP +D SD+ED+              + E  K
Sbjct: 79   VRTEVSP-CTLGVDYNEAAAKLENIYKLSPGTDTSDVEDVNGVIRRCRQRKRKTS-ECEK 136

Query: 821  EDGREVNDFVVRNPTKKAKRLNLANRIASRRKEEMQEESVSSQGYKDSVEEAN--VNRLI 648
            ED    +  +VRN  KKAKRL+L  RIA R K +  E+ V+S G +   +  N  ++ L+
Sbjct: 137  EDDGRTSKIIVRNQAKKAKRLSLQKRIALRIKSD--EKLVTSVGKRKGRKNENEKIDELV 194

Query: 647  RDYSVATDHVSMDWKKMKIPPVLPASEHAWLFKLMQPMKALQESKDMLQKDIGKEPTSNE 468
            R+YS +TD  S+DWKKMKIPPVL ++EHAWLFKLMQPMKA  + K+ LQ++ G+EPT  E
Sbjct: 195  REYSSSTDLASLDWKKMKIPPVLTSAEHAWLFKLMQPMKASLQVKEHLQENSGREPTEGE 254

Query: 467  LAAAVNMSSVEVRRHLRVGRVARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAK 288
            LA A +M  ++VR+ + VGR ARNKLIKHNLRLVLF INKYFQ++ANG ++QDLCQAG K
Sbjct: 255  LAEATDMDVLQVRKQIEVGRAARNKLIKHNLRLVLFVINKYFQDYANGPRYQDLCQAGVK 314

Query: 287  GLIVAIDRFEPKRKSQLSTYGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLM 108
            GL+ AIDRFEPKR+ +LSTYGLFWIRHAI+RSMTLSSFTRVS+GLES+R EIQK KL+L 
Sbjct: 315  GLMTAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESIRSEIQKAKLELW 374

Query: 107  FELNRIPKEEEIAEKMGISLERYHEVMRASQGVIS 3
            F+L R P  EEI EK+GIS+ERYHEVMRAS+ V+S
Sbjct: 375  FQLLRKPTGEEIIEKVGISIERYHEVMRASKPVLS 409


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  428 bits (1101), Expect = e-117
 Identities = 229/401 (57%), Positives = 289/401 (72%), Gaps = 9/401 (2%)
 Frame = -2

Query: 1178 RFAELHSPLKRPLILAFKTDKQKNI-LITPSEPIRIPVESPKESKRLRRSENKPAKRVKA 1002
            +F+   S LKRP I+AFK DK  N  L++P E + +PVES    K+   + +KP KRVKA
Sbjct: 20   KFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESNNRRKKRSGNTSKPLKRVKA 79

Query: 1001 VATDEAPFCTLDLDFNEAAVKLENLYNLSPPSDVSDLEDIGSXXXXXXXXXXXKAGEGNK 822
            V  DEA  C+LDLD+NEAA KLEN++ LSP ++ SD E               ++  G K
Sbjct: 80   VLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSDKE-----------CKDGRSKRGQK 128

Query: 821  EDGREVN---DFVVRNPTKKAKRLNLANRIASRRKEE-----MQEESVSSQGYKDSVEEA 666
               +  N   D +VRN TK+ KRL+L  RIA + K+E     +  +   ++   D +++ 
Sbjct: 129  RSKKSANRPGDGIVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRKQKDTKNEADEIDDD 188

Query: 665  NVNRLIRDYSVATDHVSMDWKKMKIPPVLPASEHAWLFKLMQPMKALQESKDMLQKDIGK 486
             ++RL+RDYS +TD VS+DWKKMKIPPVLP+SEH  LFKL+QPMKAL E ++ LQK +G+
Sbjct: 189  EIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALVEVQEELQKGLGR 248

Query: 485  EPTSNELAAAVNMSSVEVRRHLRVGRVARNKLIKHNLRLVLFAINKYFQEFANGAKFQDL 306
            EPT  ELA A NM+ ++VRR L VGR ARNKLIKHNLRLVLF INKYF++FA+G KFQDL
Sbjct: 249  EPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDL 308

Query: 305  CQAGAKGLIVAIDRFEPKRKSQLSTYGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQK 126
            CQAG KGLI AIDRFEPKRK +LSTY LFWIRHAI+RSMTLSSFTRVS+GL+SVRVEIQ+
Sbjct: 309  CQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQR 368

Query: 125  TKLQLMFELNRIPKEEEIAEKMGISLERYHEVMRASQGVIS 3
             KL+L+ EL+R+P E EI  K+GIS ERY EVMRA++ V S
Sbjct: 369  AKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYS 409


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
          Length = 512

 Score =  428 bits (1101), Expect = e-117
 Identities = 230/386 (59%), Positives = 292/386 (75%), Gaps = 3/386 (0%)
 Frame = -2

Query: 1151 KRPLILAFKTDKQ-KNILITPSEPIRIPVESPKESKRLRRSENKPAKRVKAVATDEAPFC 975
            KRP+ILAFK +K  K  L++P E I +P+E+ K+ ++     ++  KRV+AV+T E   C
Sbjct: 29   KRPIILAFKGNKSNKTTLVSPQEKIPLPLETAKKHQKRVGKTSESLKRVRAVSTVETSPC 88

Query: 974  TLDLDFNEAAVKLENLYNLSPPSDVSDLEDIGSXXXXXXXXXXXKAGEGNKEDGREVNDF 795
            TLD+D+NEAA KLEN+Y LSP SD  ++EDI S            + E  ++DG    D 
Sbjct: 89   TLDVDYNEAAAKLENIYKLSPVSDTCNVEDIDSKIERVLRRRKKVSEE--RDDGN--CDN 144

Query: 794  VVRNPTKKAKRLNLANRIASRR--KEEMQEESVSSQGYKDSVEEANVNRLIRDYSVATDH 621
            VVRN  KKAKRL+L  RIA +   KEE+ +++   +  K+ V+  N++ LIRDYS +TD 
Sbjct: 145  VVRNQNKKAKRLSLDKRIALKNNAKEEVIDQTQKKRNVKNRVQ--NIDVLIRDYSASTDL 202

Query: 620  VSMDWKKMKIPPVLPASEHAWLFKLMQPMKALQESKDMLQKDIGKEPTSNELAAAVNMSS 441
            VSMDWKKMKIPPVLP+SEHAWLFKLMQPMKAL ++K+ L K++ KE T  ELA A NMS 
Sbjct: 203  VSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQAKEDL-KEVDKEITGGELADATNMSI 261

Query: 440  VEVRRHLRVGRVARNKLIKHNLRLVLFAINKYFQEFANGAKFQDLCQAGAKGLIVAIDRF 261
            ++VR+ + VGR ARNKLIKHNLRLVLF INKYFQ+FA+G +FQDLCQAG KGLI AIDRF
Sbjct: 262  IQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQDFASGPRFQDLCQAGVKGLITAIDRF 321

Query: 260  EPKRKSQLSTYGLFWIRHAIMRSMTLSSFTRVSYGLESVRVEIQKTKLQLMFELNRIPKE 81
            EPKR+ QLSTY LFWIRH+I+RS+TLSSFTRV +GLE VRV+IQ+TKL+L FEL R P E
Sbjct: 322  EPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERVRVDIQRTKLKLTFELQRSPTE 381

Query: 80   EEIAEKMGISLERYHEVMRASQGVIS 3
            EE+ E++GISLERYHEVM+AS+ ++S
Sbjct: 382  EELVERIGISLERYHEVMKASKPILS 407


Top