BLASTX nr result

ID: Papaver22_contig00032547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00032547
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    65   6e-09
ref|NP_175213.1| putative F-box protein [Arabidopsis thaliana] g...    56   3e-06

>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/90 (37%), Positives = 53/90 (58%)
 Frame = -2

Query: 276 LIPILLNLPVRSLIVFKCVSKGWSSLITDPFFIHKYTIQSRLSIPGLFLLKLSYADNCGY 97
           L  I L  PV+ L+ F+ VSK W SLI+DP F H++  +S  S+PG+ L       N  +
Sbjct: 39  LTEIFLRTPVKPLLRFRSVSKRWLSLISDPHFCHRHARRSSASVPGVLL----GLPNSNF 94

Query: 96  EFIRLDDNKVTGGVPFKLLNFVNDAVGLKI 7
           +FI  D+ K +   P + L+F+ D +G+K+
Sbjct: 95  DFISFDEKKAS-EPPLRSLDFIGDPLGVKV 123


>ref|NP_175213.1| putative F-box protein [Arabidopsis thaliana]
           gi|75263267|sp|Q9FZF8.1|FB44_ARATH RecName:
           Full=Putative F-box protein At1g47790
           gi|9802587|gb|AAF99789.1|AC012463_6 T2E6.11 [Arabidopsis
           thaliana] gi|332194093|gb|AEE32214.1| putative F-box
           protein [Arabidopsis thaliana]
          Length = 389

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/50 (56%), Positives = 34/50 (68%)
 Frame = -2

Query: 267 ILLNLPVRSLIVFKCVSKGWSSLITDPFFIHKYTIQSRLSIPGLFLLKLS 118
           ILL LPV+S++ F+CVSK WSS+ITDP+FI  Y  QS      LF  K S
Sbjct: 33  ILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTRQSLLFCFKQS 82


Top