BLASTX nr result

ID: Papaver22_contig00032485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00032485
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21655.3| unnamed protein product [Vitis vinifera]              123   3e-26
ref|XP_003540645.1| PREDICTED: DNA repair protein XRCC2 homolog ...    95   1e-17
gb|EAZ14306.1| hypothetical protein OsJ_04232 [Oryza sativa Japo...    82   9e-14
ref|XP_003567316.1| PREDICTED: DNA repair protein XRCC2 homolog ...    80   3e-13
ref|XP_003538977.1| PREDICTED: DNA repair protein XRCC2 homolog ...    80   3e-13

>emb|CBI21655.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  123 bits (308), Expect = 3e-26
 Identities = 70/143 (48%), Positives = 94/143 (65%), Gaps = 6/143 (4%)
 Frame = +3

Query: 3   TPLPVGGDNRKSLSLQSVVETVVKEIQKXXXXXXXXXXATKATILGG----GDFKR-SFG 167
           T L +  ++RK LSLQS+ ETVV+EI+K          ATKATILG      + KR S  
Sbjct: 183 TSLHLESNSRKRLSLQSISETVVEEIRKLLLVHPMLVLATKATILGDTYSTNEVKRTSMK 242

Query: 168 RAPHDASDFRT-TRSSQKHSYREYMPSVWQLFITHRILLQVSGDDPADRGHQDDSTYMCE 344
            + +D S+ RT T   QK SYRE+MP VWQ F+THRIL++ + DDPA+  +Q  S ++ E
Sbjct: 243 LSSNDPSNLRTVTGGPQKLSYREFMPLVWQSFVTHRILVRAADDDPANSKYQSRSIFLSE 302

Query: 345 WLLPSLGFSEKFCVTDLGLFMVT 413
           WL+PSL FS+KF V D G+F+V+
Sbjct: 303 WLMPSLNFSDKFIVRDAGVFVVS 325


>ref|XP_003540645.1| PREDICTED: DNA repair protein XRCC2 homolog [Glycine max]
          Length = 310

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 51/130 (39%), Positives = 70/130 (53%), Gaps = 2/130 (1%)
 Frame = +3

Query: 24  DNRKSLSLQSVVETVVKEIQKXXXXXXXXXXATKATILGG--GDFKRSFGRAPHDASDFR 197
           + +K L LQ+V E VV+ I+K          ATK+ I G               +     
Sbjct: 179 NRKKKLFLQTVSEAVVQNIKKLLQVHPMLIIATKSVIFGNRYSTASNEVKGNMEERCSKN 238

Query: 198 TTRSSQKHSYREYMPSVWQLFITHRILLQVSGDDPADRGHQDDSTYMCEWLLPSLGFSEK 377
            TR+ Q + YREYMPSVWQ F+THRIL++ S + P    +Q+ S Y+ EWLLP L F +K
Sbjct: 239 VTRNHQNYLYREYMPSVWQSFVTHRILVRSSDEHPVTTNNQNSSFYLLEWLLPRLSFPDK 298

Query: 378 FCVTDLGLFM 407
             V D G+F+
Sbjct: 299 IVVKDAGVFV 308


>gb|EAZ14306.1| hypothetical protein OsJ_04232 [Oryza sativa Japonica Group]
          Length = 284

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 9/135 (6%)
 Frame = +3

Query: 33  KSLSLQSVVETVVKEIQKXXXXXXXXXXATKATILG----GGDFKRSFGRAPHDASDFRT 200
           ++LSLQS+ ETVV++++           ATKA I G    G DF+R   +   + S  R 
Sbjct: 149 RTLSLQSMTETVVQKLRNFLQLQPVLVMATKAPIYGEGFTGNDFQRGTSKQMLEDSTMRC 208

Query: 201 TRSSQKH--SYREYMPSVWQLFITHRILLQVSGDDPADRGHQDDSTY---MCEWLLPSLG 365
               ++   SYRE+MPSVWQ F+THRI LQ  G +      Q++        EW+ PSL 
Sbjct: 209 IGQEEEKNISYREFMPSVWQSFVTHRIKLQDLGQEAELFSGQENKELPLRTSEWMQPSLN 268

Query: 366 FSEKFCVTDLGLFMV 410
             +KF +TD G+ ++
Sbjct: 269 TKDKFSITDDGVILI 283


>ref|XP_003567316.1| PREDICTED: DNA repair protein XRCC2 homolog [Brachypodium
           distachyon]
          Length = 335

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 8/141 (5%)
 Frame = +3

Query: 12  PVGGDNRKSLSLQSVVETVVKEIQKXXXXXXXXXXATKATILGGG-----DFKRSFGR-A 173
           P      K+ SLQS+ E+VV+EI+K           +KA I G G     DF+R   +  
Sbjct: 194 PTRDSKGKTQSLQSITESVVQEIRKFLQLQPILVLVSKAHIYGEGITTSNDFQRGTSKFL 253

Query: 174 PHDASDFRTTRSSQK--HSYREYMPSVWQLFITHRILLQVSGDDPADRGHQDDSTYMCEW 347
             D++  R ++  ++   S REYMPSVWQ F+THRI LQ      +++  +  S +  EW
Sbjct: 254 TEDSTVLRYSKREEEINTSCREYMPSVWQTFVTHRIKLQEESGISSEQESEVLSIHTSEW 313

Query: 348 LLPSLGFSEKFCVTDLGLFMV 410
           + PSL   EKF + D G+ ++
Sbjct: 314 VRPSLNIKEKFYIRDSGVVVI 334


>ref|XP_003538977.1| PREDICTED: DNA repair protein XRCC2 homolog [Glycine max]
          Length = 264

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 35/68 (51%), Positives = 46/68 (67%)
 Frame = +3

Query: 204 RSSQKHSYREYMPSVWQLFITHRILLQVSGDDPADRGHQDDSTYMCEWLLPSLGFSEKFC 383
           R+ Q   YREYMPSVWQ F+THRIL++ S + P    +Q+ S Y+ EWLLP L F +K  
Sbjct: 195 RNHQNFQYREYMPSVWQSFVTHRILVRSSDEHPVTTNYQNSSFYLLEWLLPRLSFPDKIV 254

Query: 384 VTDLGLFM 407
           V D G+F+
Sbjct: 255 VKDAGVFV 262


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