BLASTX nr result

ID: Papaver22_contig00032416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00032416
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|2...    85   6e-15
dbj|BAF03051.1| DNA ligase IV [Populus nigra]                          78   9e-13
emb|CBI17913.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]      66   3e-09
gb|EEE61635.1| hypothetical protein OsJ_16077 [Oryza sativa Japo...    66   4e-09

>ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|222866696|gb|EEF03827.1|
            predicted protein [Populus trichocarpa]
          Length = 1242

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 12/157 (7%)
 Frame = +3

Query: 6    QKLDEEKYNLKPDGLEESNIEMSEHEISDTSEKDGKSISEEHAVKNVRTSAASEVVEKRK 185
            QKL E+ YNLKP GLEESN +     ++D+  K+  S   + A+K+     + E    RK
Sbjct: 909  QKLLEDTYNLKPSGLEESNCKEVLPSVTDSEAKEKGS---KAALKDSNKLGSLEKETTRK 965

Query: 186  RGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASSDDTS--------NKDA 341
            RGRP  G+TK+G+  A QAR+TR +   +PAK+   + ++S S DD +        N++ 
Sbjct: 966  RGRPAGGSTKKGKIGAGQARRTRARIVNKPAKISVEKSDESCSHDDKNEENDMSDGNEEI 1025

Query: 342  IGSKRGAQGVQGSI----TGLSQSRRTRAKMGAKHAK 440
             G K   +   GS      G  Q+ RTR ++  K AK
Sbjct: 1026 HGGKPAGRPAGGSTKKGKIGAGQALRTRTRIANKPAK 1062


>dbj|BAF03051.1| DNA ligase IV [Populus nigra]
          Length = 1319

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 25/171 (14%)
 Frame = +3

Query: 6    QKLDEEKYNLKPDGLEESN-------IEMSE----------HEISDTSEKDGKSISEEHA 134
            QKL E+ YNLKP GLEESN       ++M E            +   ++ + K    + A
Sbjct: 909  QKLLEDTYNLKPSGLEESNCKEIVCDLDMEEATPISDGAKNERLPSVTDSEAKEKGSKAA 968

Query: 135  VKNVRTSAASEVVEKRKRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSAS 314
            +K+     + E    RKRGRP  G+TK+G+  A QA++TR +   +PAK+   + ++S S
Sbjct: 969  LKDSNKLGSLEKETTRKRGRPAGGSTKKGKIGAGQAQRTRARIVNKPAKISVEKSDESCS 1028

Query: 315  SDDTS--------NKDAIGSKRGAQGVQGSITGLSQSRRTRAKMGAKHAKS 443
             DD +        N++  G K      +    G   +RRTRA +  K AK+
Sbjct: 1029 QDDKNEENDMSDGNEEIHGGKPAGGITKKRKMGAGLARRTRACIVNKPAKT 1079


>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 17/140 (12%)
 Frame = +3

Query: 6    QKLDEEKYNLKPDGLEESNIEMSEHEISDTS----------------EKDGKSISEEHAV 137
            ++L E+KY+LKP+GLEESN    +H+I   +                +K+GK    +   
Sbjct: 901  RRLQEQKYSLKPEGLEESNFGECKHDIDVEAPSVLDSVENQNLVSFPDKEGKQGRGKAPP 960

Query: 138  KNVRTSAASEVVEKRKRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASS 317
            +++   A+ +  EKRKRGRP   +TK+G+   SQAR+TR +   +P K+ + E + S S 
Sbjct: 961  ESISILASPKRDEKRKRGRPAGPSTKKGKAGFSQARRTRPR-IGKPPKIYENESDASDSG 1019

Query: 318  DDTSNKDA-IGSKRGAQGVQ 374
            +    +   +G      GV+
Sbjct: 1020 EKMEEEGTKMGGNHAIHGVE 1039


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 17/140 (12%)
 Frame = +3

Query: 6    QKLDEEKYNLKPDGLEESNIEMSEHEISDTS----------------EKDGKSISEEHAV 137
            ++L E+KY+LKP+GLEESN    +H+I   +                +K+GK    +   
Sbjct: 900  RRLQEQKYSLKPEGLEESNFGECKHDIDVEAPSVLDSVENQNLVSFPDKEGKQGRGKAPP 959

Query: 138  KNVRTSAASEVVEKRKRGRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKSASS 317
            +++   A+ +  EKRKRGRP   +TK+G+   SQAR+TR +   +P K+ + E + S S 
Sbjct: 960  ESISILASPKRDEKRKRGRPAGPSTKKGKAGFSQARRTRPR-IGKPPKIYENESDASDSG 1018

Query: 318  DDTSNKDA-IGSKRGAQGVQ 374
            +    +   +G      GV+
Sbjct: 1019 EKMEEEGTKMGGNHAIHGVE 1038


>gb|EEE61635.1| hypothetical protein OsJ_16077 [Oryza sativa Japonica Group]
          Length = 1322

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 5/151 (3%)
 Frame = +3

Query: 9    KLDEEKYNLKPDGLEESNIEMSEHEISDTSEKDGKSISEEHAVKNVRTSAASEVVEKRKR 188
            +L E  Y+LKPD LEE  IE SE  +   ++K           +N +   +      RKR
Sbjct: 927  RLPETTYSLKPDTLEEIEIERSEETVQPCNDK---------LEENEKADTSHVKHAPRKR 977

Query: 189  GRPTLGNTKRGRTVASQARQTRVKGRTRPAKLDQTEPEKS-----ASSDDTSNKDAIGSK 353
            GRP+   ++  +      R+TR +   + AK+D  EPE+S        D   + D I SK
Sbjct: 978  GRPSSSASRTAKPAPRPVRRTRARRGNQHAKIDDVEPEESDHGETGLDDQIPDTDNI-SK 1036

Query: 354  RGAQGVQGSITGLSQSRRTRAKMGAKHAKSD 446
                            RRTRA+ G +HAK D
Sbjct: 1037 MEVDSFDKDQVSARPVRRTRARRGKQHAKID 1067


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