BLASTX nr result

ID: Papaver22_contig00032050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00032050
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...   138   5e-31
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein...   129   2e-28
ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   129   3e-28
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein...   129   3e-28
ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein...   128   6e-28

>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
            product [Vitis vinifera]
          Length = 1091

 Score =  138 bits (347), Expect = 5e-31
 Identities = 80/134 (59%), Positives = 88/134 (65%), Gaps = 1/134 (0%)
 Frame = -1

Query: 401  KTKRTADEVRATVAELKNAVRVFSQLSAASSLQFHGFDEKKIETHVGYCKHLLEAAKVHC 222
            KTKRTADEVR+TVAELKNAVR+FSQLSAAS+L FHGFDEKKIETHVGYCKHLLEAAKVHC
Sbjct: 804  KTKRTADEVRSTVAELKNAVRIFSQLSAASNLHFHGFDEKKIETHVGYCKHLLEAAKVHC 863

Query: 221  XXXXXXXXXXXXXXEVARQVSLXXXXXXXXXXXXKLQLEKRKQEDELXXXXXXXXXXXXX 42
                          E+ARQV+L            K QLE+RKQEDEL             
Sbjct: 864  EAAEREELQNRHRVELARQVNLAEEARRKAEEQRKFQLERRKQEDELKRVMQQEQHFERV 923

Query: 41   XXQWRS-SAPSKRK 3
              QW+S +  SKRK
Sbjct: 924  KEQWKSNNLNSKRK 937


>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1088

 Score =  129 bits (325), Expect = 2e-28
 Identities = 74/133 (55%), Positives = 84/133 (63%)
 Frame = -1

Query: 401  KTKRTADEVRATVAELKNAVRVFSQLSAASSLQFHGFDEKKIETHVGYCKHLLEAAKVHC 222
            K KRTADEVRATVAEL+NAVRVFSQLSAAS+L  HGFDEKKI+THVGYC HLL AAKVH 
Sbjct: 803  KAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFDEKKIDTHVGYCNHLLSAAKVHL 862

Query: 221  XXXXXXXXXXXXXXEVARQVSLXXXXXXXXXXXXKLQLEKRKQEDELXXXXXXXXXXXXX 42
                          E+ARQV+L            K Q+E+RKQEDEL             
Sbjct: 863  EAAEHEEQQVRQRQELARQVALAEEARRKAEEQRKFQMERRKQEDELKRVQKQEEHFRRV 922

Query: 41   XXQWRSSAPSKRK 3
              QW+SS+ SKR+
Sbjct: 923  KEQWKSSSHSKRR 935


>ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
            CTR9 homolog [Cucumis sativus]
          Length = 1050

 Score =  129 bits (323), Expect = 3e-28
 Identities = 74/133 (55%), Positives = 84/133 (63%)
 Frame = -1

Query: 401  KTKRTADEVRATVAELKNAVRVFSQLSAASSLQFHGFDEKKIETHVGYCKHLLEAAKVHC 222
            KTKRTADEVR+TVAEL+NAVRVFSQLSAAS+L FHGFDEKKI+THVGYCKHLLEAA VH 
Sbjct: 777  KTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDTHVGYCKHLLEAAGVHL 836

Query: 221  XXXXXXXXXXXXXXEVARQVSLXXXXXXXXXXXXKLQLEKRKQEDELXXXXXXXXXXXXX 42
                          E+ARQV+L            K QLE+RK EDE              
Sbjct: 837  KAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQLERRKLEDEEKRMMQQEQHFKRV 896

Query: 41   XXQWRSSAPSKRK 3
              QW+S  P+KR+
Sbjct: 897  KEQWKSITPAKRR 909


>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
            sativus]
          Length = 1074

 Score =  129 bits (323), Expect = 3e-28
 Identities = 74/133 (55%), Positives = 84/133 (63%)
 Frame = -1

Query: 401  KTKRTADEVRATVAELKNAVRVFSQLSAASSLQFHGFDEKKIETHVGYCKHLLEAAKVHC 222
            KTKRTADEVR+TVAEL+NAVRVFSQLSAAS+L FHGFDEKKI+THVGYCKHLLEAA VH 
Sbjct: 801  KTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHGFDEKKIDTHVGYCKHLLEAAGVHL 860

Query: 221  XXXXXXXXXXXXXXEVARQVSLXXXXXXXXXXXXKLQLEKRKQEDELXXXXXXXXXXXXX 42
                          E+ARQV+L            K QLE+RK EDE              
Sbjct: 861  KAAEHEEQQIRQRQELARQVALAEDARRKADEQRKFQLERRKLEDEEKRMMQQEQHFKRV 920

Query: 41   XXQWRSSAPSKRK 3
              QW+S  P+KR+
Sbjct: 921  KEQWKSITPAKRR 933


>ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1086

 Score =  128 bits (321), Expect = 6e-28
 Identities = 73/133 (54%), Positives = 83/133 (62%)
 Frame = -1

Query: 401  KTKRTADEVRATVAELKNAVRVFSQLSAASSLQFHGFDEKKIETHVGYCKHLLEAAKVHC 222
            K KRTADEVRATVAEL+NAVRVFSQLSAAS+L  HGFDEKKI+THVGYC HLL AAKVH 
Sbjct: 800  KAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFDEKKIDTHVGYCNHLLSAAKVHL 859

Query: 221  XXXXXXXXXXXXXXEVARQVSLXXXXXXXXXXXXKLQLEKRKQEDELXXXXXXXXXXXXX 42
                          E+ARQV+             K Q+E+RKQEDEL             
Sbjct: 860  EAAEREEQQVRQRQELARQVAFAEEARRKAEEQRKFQMERRKQEDELKRVQQQEEHFRRV 919

Query: 41   XXQWRSSAPSKRK 3
              QW+SS+ SKR+
Sbjct: 920  KEQWKSSSHSKRR 932


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