BLASTX nr result

ID: Papaver22_contig00031979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00031979
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269045.1| PREDICTED: transcription initiation factor I...    88   6e-16
emb|CAN74371.1| hypothetical protein VITISV_004775 [Vitis vinifera]    88   6e-16
ref|XP_002284342.1| PREDICTED: transcription initiation factor I...    87   1e-15
gb|ABR16853.1| unknown [Picea sitchensis]                              86   3e-15
ref|XP_002277679.1| PREDICTED: transcription initiation factor I...    85   7e-15

>ref|XP_002269045.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|296088031|emb|CBI35314.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/50 (80%), Positives = 45/50 (90%)
 Frame = -1

Query: 518 SDEKKLLRDISMATGVVEGTIRNSYEDLYPYAVRLIPTWYGKEEKLRNLC 369
           SDEKKLLRDIS+ATGV EGTIRNSY+DLYP+  R+IP+WY KEE LRNLC
Sbjct: 261 SDEKKLLRDISIATGVAEGTIRNSYKDLYPHISRIIPSWYAKEEDLRNLC 310


>emb|CAN74371.1| hypothetical protein VITISV_004775 [Vitis vinifera]
          Length = 312

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/50 (80%), Positives = 45/50 (90%)
 Frame = -1

Query: 518 SDEKKLLRDISMATGVVEGTIRNSYEDLYPYAVRLIPTWYGKEEKLRNLC 369
           SDEKKLLRDIS+ATGV EGTIRNSY+DLYP+  R+IP+WY KEE LRNLC
Sbjct: 261 SDEKKLLRDISIATGVAEGTIRNSYKDLYPHISRIIPSWYAKEEDLRNLC 310


>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|297739630|emb|CBI29812.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 39/50 (78%), Positives = 45/50 (90%)
 Frame = -1

Query: 518 SDEKKLLRDISMATGVVEGTIRNSYEDLYPYAVRLIPTWYGKEEKLRNLC 369
           SDEKKLLRDIS+ATGV EGTIRNSY+DLYP+  ++IP+WY KEE LRNLC
Sbjct: 261 SDEKKLLRDISIATGVAEGTIRNSYKDLYPHISKIIPSWYAKEEDLRNLC 310


>gb|ABR16853.1| unknown [Picea sitchensis]
          Length = 313

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/50 (78%), Positives = 44/50 (88%)
 Frame = -1

Query: 518 SDEKKLLRDISMATGVVEGTIRNSYEDLYPYAVRLIPTWYGKEEKLRNLC 369
           S+EKKLLRDIS ATGV EGTIRNSY+DLYP+A RLIP W+ KEE L+NLC
Sbjct: 262 SEEKKLLRDISRATGVAEGTIRNSYKDLYPHAARLIPDWFAKEEDLKNLC 311


>ref|XP_002277679.1| PREDICTED: transcription initiation factor IIB [Vitis vinifera]
           gi|297734946|emb|CBI17180.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/50 (78%), Positives = 45/50 (90%)
 Frame = -1

Query: 518 SDEKKLLRDISMATGVVEGTIRNSYEDLYPYAVRLIPTWYGKEEKLRNLC 369
           SD+KKLL+DIS+ATGV EGTIRNSY+DLYPYA R+IP+ Y KEE LRNLC
Sbjct: 263 SDDKKLLKDISLATGVAEGTIRNSYKDLYPYASRIIPSSYAKEEDLRNLC 312


Top