BLASTX nr result

ID: Papaver22_contig00031978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00031978
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]    70   2e-10
ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
ref|XP_002886081.1| pentatricopeptide repeat-containing protein ...    68   7e-10
ref|NP_179280.1| pentatricopeptide repeat-containing protein [Ar...    66   3e-09
ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07

>emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/103 (40%), Positives = 55/103 (53%)
 Frame = +1

Query: 187 LNESKLIQNIITILTSSPQTEPQQLKLMNQYIPSLKPSLIQSVLSSPPLSTKPKTLLTFF 366
           L   +LIQ I TIL S+       L+ +N YIP L P L+ S+LSS  L ++P  L++FF
Sbjct: 18  LPPQELIQTITTILASNNMP----LQALNTYIPQLTPPLVLSILSSKTLISRPNILISFF 73

Query: 367 NWCQSHLPDFPQXXXXXXXXXXXXXXXXRFKKFSDVKSLLVSF 495
            W Q++LP FP                 R  KFSD KSLL+ F
Sbjct: 74  KWAQTNLPTFPHNSLPSLLSLLPSLFSHR--KFSDAKSLLLGF 114


>ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/103 (40%), Positives = 55/103 (53%)
 Frame = +1

Query: 187 LNESKLIQNIITILTSSPQTEPQQLKLMNQYIPSLKPSLIQSVLSSPPLSTKPKTLLTFF 366
           L   +LIQ I TIL S+       L+ +N YIP L P L+ S+LSS  L ++P  L++FF
Sbjct: 18  LPPQELIQTITTILASNNMP----LQALNTYIPHLTPPLVLSILSSKTLISRPNILISFF 73

Query: 367 NWCQSHLPDFPQXXXXXXXXXXXXXXXXRFKKFSDVKSLLVSF 495
            W Q++LP FP                 R  KFSD KSLL+ F
Sbjct: 74  KWAQTNLPTFPHNSLPSLLSLLPSLFSHR--KFSDAKSLLLGF 114


>ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331921|gb|EFH62340.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 743

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
 Frame = +1

Query: 193 ESKLIQNIITILTSSPQTEPQQLKLMNQYIPSLKPSLIQSVLSSPPLSTKPKTLLTFFNW 372
           ES+L++ + +ILTS    +   L+ +N YIP +   L+ S+LSSP L+ KP+TL++FF W
Sbjct: 8   ESQLLKTLTSILTSE---KTHLLETLNPYIPQITQPLLSSLLSSPSLAKKPETLVSFFQW 64

Query: 373 CQSHLPD-FPQXXXXXXXXXXXXXXXXRFKKFSDVKSLLVSF 495
            QS +P+ FP                    KF+D KSLLVS+
Sbjct: 65  AQSSIPEAFPSDSPLPLLSVVRSLLSHH--KFADAKSLLVSY 104


>ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g16880 gi|3757517|gb|AAC64219.1| putative
           salt-inducible protein [Arabidopsis thaliana]
           gi|18175643|gb|AAL59902.1| putative salt-inducible
           protein [Arabidopsis thaliana]
           gi|20465657|gb|AAM20297.1| putative salt-inducible
           protein [Arabidopsis thaliana]
           gi|330251452|gb|AEC06546.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
 Frame = +1

Query: 193 ESKLIQNIITILTSSPQTEPQQLKLMNQYIPSLKPSLIQSVLSSPPLSTKPKTLLTFFNW 372
           ES+L++ + +ILTS    +   L+ +N YIP +   L+ S+LSSP L+ KP+TL++FF W
Sbjct: 8   ESQLLKTLTSILTSE---KTHFLETLNPYIPQITQPLLTSLLSSPSLAKKPETLVSFFQW 64

Query: 373 CQSHLPD-FPQXXXXXXXXXXXXXXXXRFKKFSDVKSLLVSF 495
            Q+ +P+ FP                    KF+D KSLLVS+
Sbjct: 65  AQTSIPEAFPSDSPLPLISVVRSLLSHH--KFADAKSLLVSY 104


>ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
           gi|449529106|ref|XP_004171542.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 40/102 (39%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
 Frame = +1

Query: 193 ESKLIQNIITILTSSPQTEPQQLKLMNQYIPSLKPSLIQSVLSSPPLSTKPKTLLTFFNW 372
           E +LIQ I TIL +   T+P  L  +  Y   L PSLI S+ +S  LS+ P  LL  F W
Sbjct: 18  EQQLIQTITTILNA---TKPS-LSALAPYAAHLSPSLISSIFASKALSSHPSVLLNVFKW 73

Query: 373 CQSHLPDFPQ-XXXXXXXXXXXXXXXXRFKKFSDVKSLLVSF 495
            Q H+P F                   R   FSD KSLL+SF
Sbjct: 74  AQKHVPSFSSPPNNSLSSLLTLLPSLFRHYMFSDAKSLLISF 115


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