BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00031930
         (749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   237   2e-60
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   226   5e-57
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   225   7e-57
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              224   1e-56
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   216   5e-54

>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 1475

 Score =  237 bits (605), Expect = 2e-60
 Identities = 110/171 (64%), Positives = 137/171 (80%)
 Frame = +3

Query: 105 NSCKTGHQWVKDVMLGKMTDNSFRMVIVGDPRIKLGEIGIPNDIAERLEVTECLNSWNWQ 284
           +S  +G +W+KDV+LGK  DNSFRMV+VGDP IK  EIGIP  IAERL+++E L +WNW 
Sbjct: 307 SSSSSGLRWIKDVVLGKRNDNSFRMVVVGDPNIKFSEIGIPCPIAERLQISEHLTTWNWD 366

Query: 285 KLNMCANSRLLEKGVLIVKRKGKKACMFKTDDLKIGDAVYRPLEEGDLVMINRPPSLHQH 464
           KLN C   RLLEKG + V+R+GK   + +T +L+IGD +YRPL +GD V+INRPPS+HQH
Sbjct: 367 KLNTCCEVRLLEKGDMHVRREGKLVRVRRTKELRIGDIIYRPLNDGDTVLINRPPSIHQH 426

Query: 465 SIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELRE 617
           S+IALSVK+LP  SV ++NPLIC P RGDFDGDCL  YVPQS+D+RVELRE
Sbjct: 427 SLIALSVKVLPATSVLAINPLICAPFRGDFDGDCLHGYVPQSVDTRVELRE 477


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  226 bits (575), Expect = 5e-57
 Identities = 106/183 (57%), Positives = 141/183 (77%), Gaps = 1/183 (0%)
 Frame = +3

Query: 72  NNKFDFSNKKPNSCK-TGHQWVKDVMLGKMTDNSFRMVIVGDPRIKLGEIGIPNDIAERL 248
           N + + S  K ++ K +G +W+K+V+LGK T++SFRM++VGDP+++L EIGIP  IAE L
Sbjct: 292 NLRSEKSTSKDSASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEEL 351

Query: 249 EVTECLNSWNWQKLNMCANSRLLEKGVLIVKRKGKKACMFKTDDLKIGDAVYRPLEEGDL 428
            ++E LNSWNW+K+    N RLLEKG   V+RKG  A + + +D + GD +YRPL +GD+
Sbjct: 352 LISEHLNSWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDIIYRPLTDGDI 411

Query: 429 VMINRPPSLHQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVE 608
           V+INRPPS+HQHS+IALSVK+LP  SV S+NPL C P RGDFDGDCL  Y+PQS+DSRVE
Sbjct: 412 VLINRPPSIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVE 471

Query: 609 LRE 617
           L E
Sbjct: 472 LSE 474


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score =  225 bits (574), Expect = 7e-57
 Identities = 104/176 (59%), Positives = 137/176 (77%)
 Frame = +3

Query: 90  SNKKPNSCKTGHQWVKDVMLGKMTDNSFRMVIVGDPRIKLGEIGIPNDIAERLEVTECLN 269
           ++K   S  +G +W+K+V+LGK T++SFRM++VGDP+++L EIGIP  IAE L ++E LN
Sbjct: 329 TSKDSASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEELLISEHLN 388

Query: 270 SWNWQKLNMCANSRLLEKGVLIVKRKGKKACMFKTDDLKIGDAVYRPLEEGDLVMINRPP 449
           SWNW+K+    N RLLEKG   V+RKG  A + + +D + GD +YRPL +GD+V+INRPP
Sbjct: 389 SWNWEKVTNGCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDIIYRPLTDGDIVLINRPP 448

Query: 450 SLHQHSIIALSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELRE 617
           S+HQHS+IALSVK+LP  SV S+NPL C P RGDFDGDCL  Y+PQS+DSRVEL E
Sbjct: 449 SIHQHSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSE 504


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  224 bits (571), Expect = 1e-56
 Identities = 102/167 (61%), Positives = 133/167 (79%)
 Frame = +3

Query: 117 TGHQWVKDVMLGKMTDNSFRMVIVGDPRIKLGEIGIPNDIAERLEVTECLNSWNWQKLNM 296
           +G +W+K+V+LGK T++SFRM++VGDP+++L EIGIP  IAE L ++E LNSWNW+K+  
Sbjct: 281 SGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWEKVTN 340

Query: 297 CANSRLLEKGVLIVKRKGKKACMFKTDDLKIGDAVYRPLEEGDLVMINRPPSLHQHSIIA 476
             N RLLEKG   V+RKG  A + + +D + GD +YRPL +GD+V+INRPPS+HQHS+IA
Sbjct: 341 GCNLRLLEKGQTYVRRKGTLAPVRRMNDFQAGDIIYRPLTDGDIVLINRPPSIHQHSVIA 400

Query: 477 LSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELRE 617
           LSVK+LP  SV S+NPL C P RGDFDGDCL  Y+PQS+DSRVEL E
Sbjct: 401 LSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSE 447


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
           gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
           [Populus trichocarpa]
          Length = 1517

 Score =  216 bits (549), Expect = 5e-54
 Identities = 99/167 (59%), Positives = 128/167 (76%)
 Frame = +3

Query: 117 TGHQWVKDVMLGKMTDNSFRMVIVGDPRIKLGEIGIPNDIAERLEVTECLNSWNWQKLNM 296
           +G +W+KDV+LGK  D+SFRMVIVGDP ++L EIGIP  IAERL+++E L +WNW+KLN 
Sbjct: 344 SGLRWIKDVVLGKRNDHSFRMVIVGDPHLQLHEIGIPCHIAERLQISESLTAWNWEKLNA 403

Query: 297 CANSRLLEKGVLIVKRKGKKACMFKTDDLKIGDAVYRPLEEGDLVMINRPPSLHQHSIIA 476
           C      EKG + V+R+G    +    +L++GD +YRPL +GD V+INRPPS+HQHS+IA
Sbjct: 404 CFEKSRFEKGDMHVRREGNLVRVRHMKELRLGDIIYRPLNDGDTVLINRPPSIHQHSLIA 463

Query: 477 LSVKILPTGSVASLNPLICDPLRGDFDGDCLQCYVPQSIDSRVELRE 617
           LSVK+LP  SV ++NPL C P R DFDGDCL  YVPQS+D+RVEL E
Sbjct: 464 LSVKVLPVPSVLAINPLCCPPFRADFDGDCLHGYVPQSVDTRVELTE 510