BLASTX nr result
ID: Papaver22_contig00031876
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00031876
(626 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270318.1| PREDICTED: gamma-tubulin complex component 4... 298 5e-79
ref|XP_002523094.1| gamma-tubulin complex component, putative [R... 294 8e-78
ref|XP_002320339.1| tubulin gamma complex-associated protein [Po... 285 6e-75
emb|CAN68024.1| hypothetical protein VITISV_003625 [Vitis vinifera] 281 9e-74
sp|Q9SC88.1|GCP4_MEDTR RecName: Full=Gamma-tubulin complex compo... 270 2e-70
>ref|XP_002270318.1| PREDICTED: gamma-tubulin complex component 4 homolog [Vitis
vinifera] gi|297743902|emb|CBI36872.3| unnamed protein
product [Vitis vinifera]
Length = 743
Score = 298 bits (763), Expect = 5e-79
Identities = 149/208 (71%), Positives = 178/208 (85%)
Frame = +2
Query: 2 FKCQDAISHQLVSRGPQKVQGFTGRFAFHKEFSVDTKMVVEELLPQAEADKVDAMLKKLK 181
F+ QD ++HQ + +G +VQG TGRF+F KE +D +++ EELLPQ+EADK++AML++LK
Sbjct: 305 FRFQDTLNHQQIPKGSHRVQGLTGRFSFQKEPFMDMQLIGEELLPQSEADKIEAMLQELK 364
Query: 182 DSSEFHKRSFESAVDAVRVIAASHLWQLVVVRADLNGHLRALKDYFLLAKGDFFQCFLEE 361
+SSEFHKRSFE AVD++R IAASHLWQLVVVRADLNGHL+ALKDYFLLAKGDFFQCFLEE
Sbjct: 365 ESSEFHKRSFECAVDSIRAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEE 424
Query: 362 SRQLMRLPPRQSTAEADLVVPFQLAAIKTIGDEDKYFSRVSLRMPSSGITVASSQGGLLP 541
SRQ+MRLPPRQSTAEADL+VPFQLAAIKTIGDEDKY+SRVSLRMPS GITV SSQ L
Sbjct: 425 SRQMMRLPPRQSTAEADLMVPFQLAAIKTIGDEDKYYSRVSLRMPSFGITVKSSQADLPK 484
Query: 542 KSSGDVGLTYQGTASSELSLDGWDGISL 625
+ + G+ SSE+SL+GWDGI+L
Sbjct: 485 EKTYADGI----LGSSEMSLEGWDGIAL 508
>ref|XP_002523094.1| gamma-tubulin complex component, putative [Ricinus communis]
gi|223537656|gb|EEF39279.1| gamma-tubulin complex
component, putative [Ricinus communis]
Length = 756
Score = 294 bits (753), Expect = 8e-78
Identities = 152/211 (72%), Positives = 177/211 (83%), Gaps = 3/211 (1%)
Frame = +2
Query: 2 FKCQDAISHQLVSRGPQKVQGFTGRFAFHKEFSVDTKMVVEELLPQAEADKVDAMLKKLK 181
F+C+D++ +Q V +G Q +QGF GRF KE VD+ ++ EELLPQ+EADK++A+L+ LK
Sbjct: 306 FQCKDSLHNQQVPKGGQNIQGFVGRFPVQKEPFVDSNLIGEELLPQSEADKIEALLQGLK 365
Query: 182 DSSEFHKRSFESAVDAVRVIAASHLWQLVVVRADLNGHLRALKDYFLLAKGDFFQCFLEE 361
+SSEFHKRSFESAVD++R IAASHLWQLVVVRADLNGHL+ALKDYFLLAKGDFFQCFLEE
Sbjct: 366 ESSEFHKRSFESAVDSIRAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEE 425
Query: 362 SRQLMRLPPRQSTAEADLVVPFQLAAIKTIGDEDKYFSRVSLRMPSSGITVASSQGGLLP 541
SRQLMRLPPRQSTAEADL+VPFQLAAIKTIG+EDKYFSRVSLRMPS GITV SSQ LP
Sbjct: 426 SRQLMRLPPRQSTAEADLMVPFQLAAIKTIGEEDKYFSRVSLRMPSFGITVKSSQVD-LP 484
Query: 542 KS---SGDVGLTYQGTASSELSLDGWDGISL 625
KS S A+SE+ +DGWDGI+L
Sbjct: 485 KSKAHSDSNSGAALSNAASEMFIDGWDGIAL 515
>ref|XP_002320339.1| tubulin gamma complex-associated protein [Populus trichocarpa]
gi|222861112|gb|EEE98654.1| tubulin gamma
complex-associated protein [Populus trichocarpa]
Length = 728
Score = 285 bits (728), Expect = 6e-75
Identities = 147/208 (70%), Positives = 170/208 (81%)
Frame = +2
Query: 2 FKCQDAISHQLVSRGPQKVQGFTGRFAFHKEFSVDTKMVVEELLPQAEADKVDAMLKKLK 181
F+ +D + +Q + +G QK Q TGRF F KE DT ++ EELLPQ+EADK++ ML+ LK
Sbjct: 296 FQFKDPVYNQQIPKGAQKNQVSTGRFPFQKESFEDTNLIGEELLPQSEADKIENMLRDLK 355
Query: 182 DSSEFHKRSFESAVDAVRVIAASHLWQLVVVRADLNGHLRALKDYFLLAKGDFFQCFLEE 361
+SSEFHKRSFE AVD++R IAASHLWQLVVVRADLNGHL+ALKDYFLLAKGDFFQCFLEE
Sbjct: 356 ESSEFHKRSFECAVDSIRAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEE 415
Query: 362 SRQLMRLPPRQSTAEADLVVPFQLAAIKTIGDEDKYFSRVSLRMPSSGITVASSQGGLLP 541
SRQ+MRLPPRQSTAEADL+VPFQLAAIKTIG+E+KYFSRVSLRMPS G V SSQ L
Sbjct: 416 SRQMMRLPPRQSTAEADLMVPFQLAAIKTIGEEEKYFSRVSLRMPSFGSAVKSSQVDLPK 475
Query: 542 KSSGDVGLTYQGTASSELSLDGWDGISL 625
S L+ ASSE+SLDGWDGI+L
Sbjct: 476 TGSTSASLS---NASSEISLDGWDGIAL 500
>emb|CAN68024.1| hypothetical protein VITISV_003625 [Vitis vinifera]
Length = 1529
Score = 281 bits (718), Expect = 9e-74
Identities = 144/208 (69%), Positives = 170/208 (81%)
Frame = +2
Query: 2 FKCQDAISHQLVSRGPQKVQGFTGRFAFHKEFSVDTKMVVEELLPQAEADKVDAMLKKLK 181
F+ QD ++HQ + +G +VQG TGRF+F KE +D +++ EELLPQ+EADK++
Sbjct: 1099 FRFQDTLNHQQIPKGSHRVQGLTGRFSFQKEPFMDMQLIGEELLPQSEADKIE------- 1151
Query: 182 DSSEFHKRSFESAVDAVRVIAASHLWQLVVVRADLNGHLRALKDYFLLAKGDFFQCFLEE 361
SSEFHKRSFE AVD++R IAASHLWQLVVVRADLNGHL+ALKDYFLLAKGDFFQCFLEE
Sbjct: 1152 -SSEFHKRSFECAVDSIRAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEE 1210
Query: 362 SRQLMRLPPRQSTAEADLVVPFQLAAIKTIGDEDKYFSRVSLRMPSSGITVASSQGGLLP 541
SRQ+MRLPPRQSTAEADL+VPFQLAAIKTIGDEDKY+SRVSLRMPS GITV SSQ L
Sbjct: 1211 SRQMMRLPPRQSTAEADLMVPFQLAAIKTIGDEDKYYSRVSLRMPSFGITVKSSQADLPK 1270
Query: 542 KSSGDVGLTYQGTASSELSLDGWDGISL 625
+ + G+ SSE+SL+GWDGI+L
Sbjct: 1271 EKTYADGI----LGSSEMSLEGWDGIAL 1294
>sp|Q9SC88.1|GCP4_MEDTR RecName: Full=Gamma-tubulin complex component 4 homolog
gi|6562700|emb|CAB62542.1| 85p protein [Medicago
truncatula]
Length = 739
Score = 270 bits (690), Expect = 2e-70
Identities = 144/212 (67%), Positives = 169/212 (79%), Gaps = 4/212 (1%)
Frame = +2
Query: 2 FKCQDAISHQLVSRGPQKVQGFTGRFAFHKEFSVDTKMVVEELLPQAEADKVDAMLKKLK 181
F QD + Q R P K+ GF GRF F +E ++T M VE+LLPQ+EADK++ ML LK
Sbjct: 291 FLSQDDVYPQEPKRFP-KIHGFEGRFNFQREPIINTGMRVEDLLPQSEADKIENMLLDLK 349
Query: 182 DSSEFHKRSFESAVDAVRVIAASHLWQLVVVRADLNGHLRALKDYFLLAKGDFFQCFLEE 361
+SSEFHKRSFE AVD+++ IAASHLWQLVVVRADLNGHL+ALKDYFLLAKGDFFQCFLEE
Sbjct: 350 ESSEFHKRSFECAVDSIQAIAASHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEE 409
Query: 362 SRQLMRLPPRQSTAEADLVVPFQLAAIKTIGDEDKYFSRVSLRMPSSGITVASSQGGLLP 541
SRQLMRLPPRQSTAEADL+VPFQLA++KTIG+EDKYFS+VSLRMPS GITV S +P
Sbjct: 410 SRQLMRLPPRQSTAEADLMVPFQLASLKTIGEEDKYFSKVSLRMPSYGITVKPSLLN-VP 468
Query: 542 KSSGDVGLTYQG----TASSELSLDGWDGISL 625
K++ G ASSE+S+DGWDGI+L
Sbjct: 469 KATSAAADGISGASISNASSEMSVDGWDGIAL 500