BLASTX nr result

ID: Papaver22_contig00031872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00031872
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]   288   8e-87
ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containi...   288   2e-86
ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containi...   272   5e-71
ref|XP_003608051.1| Pentatricopeptide repeat-containing protein ...   255   8e-66
ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containi...   244   2e-62

>emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
          Length = 768

 Score =  288 bits (736), Expect(2) = 8e-87
 Identities = 133/206 (64%), Positives = 165/206 (80%)
 Frame = -1

Query: 620  FYACSCLGSVEQGKLLHAHLSKTPFEWNVYVGTSLADMYAKCGNITDARASFTHISSPNV 441
            F+ACSCLGS++QG+LLHAHL KTPFE NVYVGTSL DMY+KCG+I +A+ SF  I SPNV
Sbjct: 474  FHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNV 533

Query: 440  AAWTSLINGYAYHGLGREAIILFHQMLDRGVYPNGVTFVGLLLACVHSGLVDEGMRLFSL 261
            AAWT+LING+AYHGLG EAI LF  M+++G+ PNG TFVG+L AC  +GLV+EGM++F  
Sbjct: 534  AAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHS 593

Query: 260  MTSDYNIEPMLEHYCCVVDLLGRAGRLKEAENFIDGMMLEPDWIIWGSLLRSCWSWMDME 81
            M   Y++ P LEHY CVVDLLGR+G ++EAE FI  M LE D ++WG+LL +CW WMD+E
Sbjct: 594  MERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLE 653

Query: 80   TGERVAEKLLRLDPDQITPYVIMSNI 3
             GERVAEK+   DP  I+ YVI+SNI
Sbjct: 654  VGERVAEKMFSFDPKPISSYVILSNI 679



 Score = 59.3 bits (142), Expect(2) = 8e-87
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = -3

Query: 741 TWNSMISAYIENDQPKESLKLYVAMHMLPVQKNR*TFSTLF 619
           TWNSMIS YI + QP+E+LKLY+ MH L +Q+ R TFS LF
Sbjct: 434 TWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALF 474



 Score = 51.2 bits (121), Expect(2) = 1e-07
 Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 5/172 (2%)
 Frame = -1

Query: 611 CSCLGSVEQGKLLHAHLSKTPFEWNVYVGTSLADMYAKCGNITDARASFTHISSPNVAAW 432
           C+ L  +  GKL+H  + K+  E    VG++L   YA C  I +AR  F  +   N   W
Sbjct: 148 CARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLW 207

Query: 431 TSLINGYAYHGLGREAIILFHQMLDRGVYPNGVTFVGLLLACVHSG-LVDEGMRLFSLMT 255
           + ++ GY    +  +A+ +F +M  R V    V +  L+     +G    + + +F LM 
Sbjct: 208 SLMLVGYVTCNVMDDALSVFVKMPRRDV----VAWTTLISGFSKNGDGCGKALEMFRLMM 263

Query: 254 SDYNIEPMLEHYCCVVDLLGRAGRLKEAENFIDGMM----LEPDWIIWGSLL 111
                 P    + CVV   GR G L      + G++    LE D  I G+L+
Sbjct: 264 RSGETTPNEFTFDCVVRACGRLGILSVGRT-VHGLLMKCGLEYDPSIGGALV 314



 Score = 30.8 bits (68), Expect(2) = 1e-07
 Identities = 14/40 (35%), Positives = 27/40 (67%)
 Frame = -3

Query: 741 TWNSMISAYIENDQPKESLKLYVAMHMLPVQKNR*TFSTL 622
           +WN+MIS+Y ++ +  E+L L  +MH   ++ +  TFS++
Sbjct: 105 SWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSSV 144


>ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic [Vitis vinifera]
            gi|302143682|emb|CBI22543.3| unnamed protein product
            [Vitis vinifera]
          Length = 728

 Score =  288 bits (736), Expect(2) = 2e-86
 Identities = 133/206 (64%), Positives = 165/206 (80%)
 Frame = -1

Query: 620  FYACSCLGSVEQGKLLHAHLSKTPFEWNVYVGTSLADMYAKCGNITDARASFTHISSPNV 441
            F+ACSCLGS+ QG+LLHAHL KTPFE NVYVGTSL DMY+KCG+I +A+ SF  I SPNV
Sbjct: 434  FHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNV 493

Query: 440  AAWTSLINGYAYHGLGREAIILFHQMLDRGVYPNGVTFVGLLLACVHSGLVDEGMRLFSL 261
            AAWT+LING+AYHGLG EAI LF +M+++G+ PNG TFVG+L AC  +GLV+EGM++F  
Sbjct: 494  AAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHS 553

Query: 260  MTSDYNIEPMLEHYCCVVDLLGRAGRLKEAENFIDGMMLEPDWIIWGSLLRSCWSWMDME 81
            M   Y++ P LEHY CVVDLLGR+G ++EAE FI  M LE D ++WG+LL +CW WMD+E
Sbjct: 554  MERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLE 613

Query: 80   TGERVAEKLLRLDPDQITPYVIMSNI 3
             GERVAEK+   DP  I+ YVI+SNI
Sbjct: 614  VGERVAEKMFSFDPKPISSYVILSNI 639



 Score = 57.8 bits (138), Expect(2) = 2e-86
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = -3

Query: 741 TWNSMISAYIENDQPKESLKLYVAMHMLPVQKNR*TFSTLF 619
           TWNSMIS YI + QP+E+LKLY+ MH L +Q+ + TFS LF
Sbjct: 394 TWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALF 434



 Score = 51.2 bits (121), Expect(2) = 1e-07
 Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 5/172 (2%)
 Frame = -1

Query: 611 CSCLGSVEQGKLLHAHLSKTPFEWNVYVGTSLADMYAKCGNITDARASFTHISSPNVAAW 432
           C+ L  +  GKL+H  + K+  E    VG++L   YA C  I +AR  F  +   N   W
Sbjct: 108 CARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLW 167

Query: 431 TSLINGYAYHGLGREAIILFHQMLDRGVYPNGVTFVGLLLACVHSG-LVDEGMRLFSLMT 255
           + ++ GY    +  +A+ +F +M  R V    V +  L+     +G    + + +F LM 
Sbjct: 168 SLMLVGYVTCNVMDDALSVFVKMPRRDV----VAWTTLISGFSKNGDGCGKALEIFRLMM 223

Query: 254 SDYNIEPMLEHYCCVVDLLGRAGRLKEAENFIDGMM----LEPDWIIWGSLL 111
                 P    + CVV   GR G L      + G++    LE D  I G+L+
Sbjct: 224 RSGETTPNEFTFDCVVRACGRLGILSVGRT-VHGLLMKCGLEYDPSIGGALV 274



 Score = 30.8 bits (68), Expect(2) = 1e-07
 Identities = 14/40 (35%), Positives = 27/40 (67%)
 Frame = -3

Query: 741 TWNSMISAYIENDQPKESLKLYVAMHMLPVQKNR*TFSTL 622
           +WN+MIS+Y ++ +  E+L L  +MH   ++ +  TFS++
Sbjct: 65  SWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSSV 104


>ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Glycine max]
          Length = 728

 Score =  272 bits (696), Expect = 5e-71
 Identities = 129/206 (62%), Positives = 156/206 (75%)
 Frame = -1

Query: 620  FYACSCLGSVEQGKLLHAHLSKTPFEWNVYVGTSLADMYAKCGNITDARASFTHISSPNV 441
            F ACSCL S  QG+LLHAHL KTPF+ NVYVGT+L D Y+KCG++ +A+ SF  I SPNV
Sbjct: 444  FRACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKCGHLAEAQRSFISIFSPNV 503

Query: 440  AAWTSLINGYAYHGLGREAIILFHQMLDRGVYPNGVTFVGLLLACVHSGLVDEGMRLFSL 261
            AAWT+LINGYAYHGLG EAI+LF  ML +G+ PN  TFVG+L AC H+GLV EG+R+F  
Sbjct: 504  AAWTALINGYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVLSACNHAGLVCEGLRIFHS 563

Query: 260  MTSDYNIEPMLEHYCCVVDLLGRAGRLKEAENFIDGMMLEPDWIIWGSLLRSCWSWMDME 81
            M   Y + P +EHY CVVDLLGR+G LKEAE FI  M +E D IIWG+LL + W W DME
Sbjct: 564  MQRCYGVTPTIEHYTCVVDLLGRSGHLKEAEEFIIKMPIEADGIIWGALLNASWFWKDME 623

Query: 80   TGERVAEKLLRLDPDQITPYVIMSNI 3
             GER AEKL  LDP+ I  +V++SN+
Sbjct: 624  VGERAAEKLFSLDPNPIFAFVVLSNM 649


>ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355509106|gb|AES90248.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 763

 Score =  255 bits (651), Expect = 8e-66
 Identities = 121/206 (58%), Positives = 154/206 (74%)
 Frame = -1

Query: 620  FYACSCLGSVEQGKLLHAHLSKTPFEWNVYVGTSLADMYAKCGNITDARASFTHISSPNV 441
            F AC+ L S +QG+LLHAHL+KTP++ NVYVGT+L D Y+KCG++ DA+ SFT I SPNV
Sbjct: 440  FRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNV 499

Query: 440  AAWTSLINGYAYHGLGREAIILFHQMLDRGVYPNGVTFVGLLLACVHSGLVDEGMRLFSL 261
            AAWT+LINGYAYHG G EAI  F  MLD+GV PN  TFV +L AC H+GLVDEG++ F  
Sbjct: 500  AAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHS 559

Query: 260  MTSDYNIEPMLEHYCCVVDLLGRAGRLKEAENFIDGMMLEPDWIIWGSLLRSCWSWMDME 81
            M  +Y I P +EHY CVVDLLGR+GR+KEAE FI  M ++ D +IWG+LL +   W ++E
Sbjct: 560  MQINYRITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWNNVE 619

Query: 80   TGERVAEKLLRLDPDQITPYVIMSNI 3
             GER A KL  LDP+ ++  V +SN+
Sbjct: 620  LGERAAVKLFSLDPNSVSALVTLSNM 645


>ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial-like [Cucumis sativus]
          Length = 710

 Score =  244 bits (622), Expect = 2e-62
 Identities = 121/226 (53%), Positives = 154/226 (68%)
 Frame = -1

Query: 680  YMLLCICYQYRKTDEHSLPFFYACSCLGSVEQGKLLHAHLSKTPFEWNVYVGTSLADMYA 501
            Y+ +C     R     S   F AC+CL  ++ G+ LH H  +  F+ NVYVGTSL DMYA
Sbjct: 420  YITMCRTSVERSRSTFSA-LFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYA 478

Query: 500  KCGNITDARASFTHISSPNVAAWTSLINGYAYHGLGREAIILFHQMLDRGVYPNGVTFVG 321
            KCG+I DA+ SF  +  PNVAA+T+LINGY +HGLG EA  +F +ML   V PNG T +G
Sbjct: 479  KCGSIYDAQTSFASVCLPNVAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLG 538

Query: 320  LLLACVHSGLVDEGMRLFSLMTSDYNIEPMLEHYCCVVDLLGRAGRLKEAENFIDGMMLE 141
            +L AC  +G+V EGM +F  M   Y + P LEHY CVVDLLGR+GRL EAE FI  M +E
Sbjct: 539  ILSACSCAGMVKEGMTVFHSMEKCYGVIPTLEHYACVVDLLGRSGRLYEAEAFIRCMPIE 598

Query: 140  PDWIIWGSLLRSCWSWMDMETGERVAEKLLRLDPDQITPYVIMSNI 3
             D +IWG+LL +CW WMD+E GE VA+K+L LDP  I+ Y+I+SNI
Sbjct: 599  ADRVIWGALLNACWFWMDLELGESVAKKVLSLDPKAISAYIILSNI 644


Top