BLASTX nr result

ID: Papaver22_contig00031833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00031833
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago trun...   270   1e-70
ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago...   270   1e-70
ref|XP_002511787.1| DNA binding protein, putative [Ricinus commu...   270   2e-70
ref|XP_003534589.1| PREDICTED: flap endonuclease GEN-like 1-like...   263   2e-68
ref|NP_001169528.1| uncharacterized protein LOC100383402 [Zea ma...   259   3e-67

>gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago truncatula]
          Length = 547

 Score =  270 bits (691), Expect = 1e-70
 Identities = 133/199 (66%), Positives = 159/199 (79%), Gaps = 4/199 (2%)
 Frame = +2

Query: 8   RNGAFTKCVQECVELLETLGMPVLKAKGEAEALCAKLNSEGHVDACITADSDAFLFGANC 187
           RN  F++CVQECVEL + LG+PVLKAKGEAEALCA+LNSEGHVDACIT DSDAFLFGA C
Sbjct: 47  RNSTFSRCVQECVELAKLLGIPVLKAKGEAEALCAQLNSEGHVDACITPDSDAFLFGAKC 106

Query: 188 VIKSLRPTSKEPFECYHMSDIEAGLGLKRRHLIAISLLVGNDHDLGGVPGIGIDTALRFV 367
           +IKS  P SKEPFECY+MSDIEAGLGLKR+HLIAISLLVGNDHDL GV GIGID+ALRFV
Sbjct: 107 IIKSFSPNSKEPFECYNMSDIEAGLGLKRKHLIAISLLVGNDHDLSGVQGIGIDSALRFV 166

Query: 368 QMFPEEEILNRLHDVGNGD---IPLXXXXXXXXXXFVDRDVCGSDTSSPKNK-SHCSYCG 535
           Q F E++ILNRLH++G G+   +P+            + D+   D +SP  K +HCS+CG
Sbjct: 167 QAFGEDDILNRLHEIGKGNAFQVPIDIKAEE------NMDI---DGNSPNTKQTHCSFCG 217

Query: 536 HPGSKRAHVKHACEYCTAN 592
           HPG+KR H+K +CE+C A+
Sbjct: 218 HPGNKRDHMKFSCEFCVAD 236


>ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago truncatula]
           gi|124360235|gb|ABN08248.1| Helix-hairpin-helix motif,
           class 2 [Medicago truncatula]
           gi|355498862|gb|AES80065.1| Flap endonuclease GEN-like
           protein [Medicago truncatula]
          Length = 612

 Score =  270 bits (691), Expect = 1e-70
 Identities = 133/199 (66%), Positives = 159/199 (79%), Gaps = 4/199 (2%)
 Frame = +2

Query: 8   RNGAFTKCVQECVELLETLGMPVLKAKGEAEALCAKLNSEGHVDACITADSDAFLFGANC 187
           RN  F++CVQECVEL + LG+PVLKAKGEAEALCA+LNSEGHVDACIT DSDAFLFGA C
Sbjct: 112 RNSTFSRCVQECVELAKLLGIPVLKAKGEAEALCAQLNSEGHVDACITPDSDAFLFGAKC 171

Query: 188 VIKSLRPTSKEPFECYHMSDIEAGLGLKRRHLIAISLLVGNDHDLGGVPGIGIDTALRFV 367
           +IKS  P SKEPFECY+MSDIEAGLGLKR+HLIAISLLVGNDHDL GV GIGID+ALRFV
Sbjct: 172 IIKSFSPNSKEPFECYNMSDIEAGLGLKRKHLIAISLLVGNDHDLSGVQGIGIDSALRFV 231

Query: 368 QMFPEEEILNRLHDVGNGD---IPLXXXXXXXXXXFVDRDVCGSDTSSPKNK-SHCSYCG 535
           Q F E++ILNRLH++G G+   +P+            + D+   D +SP  K +HCS+CG
Sbjct: 232 QAFGEDDILNRLHEIGKGNAFQVPIDIKAEE------NMDI---DGNSPNTKQTHCSFCG 282

Query: 536 HPGSKRAHVKHACEYCTAN 592
           HPG+KR H+K +CE+C A+
Sbjct: 283 HPGNKRDHMKFSCEFCVAD 301


>ref|XP_002511787.1| DNA binding protein, putative [Ricinus communis]
           gi|223548967|gb|EEF50456.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 609

 Score =  270 bits (689), Expect = 2e-70
 Identities = 133/194 (68%), Positives = 151/194 (77%)
 Frame = +2

Query: 2   VERNGAFTKCVQECVELLETLGMPVLKAKGEAEALCAKLNSEGHVDACITADSDAFLFGA 181
           VERNGAF KCV+ECVELLE  GMPVLKA GEAEALCA+LNS+G VDACITADSDAFLFGA
Sbjct: 110 VERNGAFLKCVKECVELLELFGMPVLKANGEAEALCAQLNSQGLVDACITADSDAFLFGA 169

Query: 182 NCVIKSLRPTSKEPFECYHMSDIEAGLGLKRRHLIAISLLVGNDHDLGGVPGIGIDTALR 361
            CVIKS++P SKEPFECY MSDIE+GL LKR+HLIAI+LLVGNDHDL GV GIG+DTALR
Sbjct: 170 KCVIKSIKPNSKEPFECYQMSDIESGLALKRKHLIAIALLVGNDHDLNGVQGIGVDTALR 229

Query: 362 FVQMFPEEEILNRLHDVGNGDIPLXXXXXXXXXXFVDRDVCGSDTSSPKNKSHCSYCGHP 541
           FVQ F E+EILN L ++G G+  +            D  +   + S     SHCS+CGHP
Sbjct: 230 FVQTFHEDEILNCLREIGKGNTNIFLGVSRVVE---DLMIDPHENSLKSKISHCSFCGHP 286

Query: 542 GSKRAHVKHACEYC 583
           GSKRAH K +CEYC
Sbjct: 287 GSKRAHFKSSCEYC 300


>ref|XP_003534589.1| PREDICTED: flap endonuclease GEN-like 1-like [Glycine max]
          Length = 607

 Score =  263 bits (671), Expect = 2e-68
 Identities = 133/197 (67%), Positives = 155/197 (78%), Gaps = 4/197 (2%)
 Frame = +2

Query: 5   ERNGAFTKCVQECVELLETLGMPVLKAKGEAEALCAKLNSEGHVDACITADSDAFLFGAN 184
           ERN  F+  VQEC EL+E LGMPVLKAKGEAEALCA+LNSEGHVDACITADSDAFLFGA 
Sbjct: 112 ERNRLFSSHVQECAELVELLGMPVLKAKGEAEALCAQLNSEGHVDACITADSDAFLFGAK 171

Query: 185 CVIKSLRPTSKEPFECYHMSDIEAGLGLKRRHLIAISLLVGNDHDLGGVPGIGIDTALRF 364
           C+IK   P SKEPFECY+MSDIEAGLGLKR+HLIAISLLVG+DHD+ GV GIG+DTAL F
Sbjct: 172 CIIKCFCPNSKEPFECYNMSDIEAGLGLKRKHLIAISLLVGDDHDINGVRGIGLDTALHF 231

Query: 365 VQMFPEEEILNRLHDVGNGD---IPLXXXXXXXXXXFVDRDVCGSDTSSPKNK-SHCSYC 532
           V+ F E++ILNRLH++G G+   IP+           V+ +V   D +SP  K SHCS+C
Sbjct: 232 VKAFSEDDILNRLHEIGKGNTSQIPICIK--------VEDNV---DGNSPNRKLSHCSFC 280

Query: 533 GHPGSKRAHVKHACEYC 583
           GHPGSK+ H+K  CEYC
Sbjct: 281 GHPGSKKDHMKFPCEYC 297


>ref|NP_001169528.1| uncharacterized protein LOC100383402 [Zea mays]
           gi|224029901|gb|ACN34026.1| unknown [Zea mays]
           gi|414886336|tpg|DAA62350.1| TPA: hypothetical protein
           ZEAMMB73_316768 [Zea mays]
          Length = 638

 Score =  259 bits (661), Expect = 3e-67
 Identities = 121/192 (63%), Positives = 148/192 (77%)
 Frame = +2

Query: 8   RNGAFTKCVQECVELLETLGMPVLKAKGEAEALCAKLNSEGHVDACITADSDAFLFGANC 187
           RN AFT+CV+ECVELLE LGMPVL+AKGEAEALCA+LN+EGHV ACITADSDAFLFGA  
Sbjct: 121 RNAAFTRCVEECVELLEYLGMPVLRAKGEAEALCAQLNNEGHVGACITADSDAFLFGAKT 180

Query: 188 VIKSLRPTSKEPFECYHMSDIEAGLGLKRRHLIAISLLVGNDHDLGGVPGIGIDTALRFV 367
           V+K LR   KEPFECYH++DIE+GLGLKR+ L+A++LL+G+DHDL GVPG G++TALRFV
Sbjct: 181 VVKVLRSNCKEPFECYHIADIESGLGLKRKQLVAMALLIGSDHDLHGVPGFGLETALRFV 240

Query: 368 QMFPEEEILNRLHDVGNGDIPLXXXXXXXXXXFVDRDVCGSDTSSPKNKSHCSYCGHPGS 547
           Q+F E+EIL++LH++G G  P               D+  S   SP    HCS+CGHPGS
Sbjct: 241 QLFDEDEILDKLHEIGKGVYPFLKGFDNPHID----DLPSSSKKSPIKSPHCSHCGHPGS 296

Query: 548 KRAHVKHACEYC 583
           K+ H+K  C YC
Sbjct: 297 KKNHIKDGCNYC 308


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