BLASTX nr result

ID: Papaver22_contig00031675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00031675
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321943.1| f-box family protein [Populus trichocarpa] g...    73   2e-11
gb|AFK37205.1| unknown [Medicago truncatula]                           71   8e-11
ref|XP_003614107.1| F-box family protein [Medicago truncatula] g...    70   2e-10
ref|XP_003614104.1| F-box family protein [Medicago truncatula] g...    70   2e-10
ref|XP_003628780.1| F-box family protein [Medicago truncatula] g...    69   4e-10

>ref|XP_002321943.1| f-box family protein [Populus trichocarpa]
           gi|222868939|gb|EEF06070.1| f-box family protein
           [Populus trichocarpa]
          Length = 360

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/78 (47%), Positives = 49/78 (62%)
 Frame = -2

Query: 234 DFISGLPDSLIHNILSFLDMKLAVQTSILSTRWRYIWTSLPILTIKRNLSDPYEVRFSNL 55
           D +S LPDS+IH ILS +D++ AVQTS+LS RWR++WTSL  L       D     F+N 
Sbjct: 18  DRLSDLPDSIIHKILSLVDLRCAVQTSVLSKRWRFLWTSLTDLNFNGTCMD-----FTNF 72

Query: 54  DEFKGFVDKVFMLRDDSD 1
             F  FV +V   R+DS+
Sbjct: 73  VTFNRFVSRVLSTREDSN 90


>gb|AFK37205.1| unknown [Medicago truncatula]
          Length = 303

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/97 (37%), Positives = 58/97 (59%)
 Frame = -2

Query: 294 EVDNFVSKMEETRDSSPNSKDFISGLPDSLIHNILSFLDMKLAVQTSILSTRWRYIWTSL 115
           +V +F+ KME+       ++D +S LPD+++ +ILSFL+ K AVQT ILSTRW+ +W  +
Sbjct: 9   DVPDFIKKMEKAIHCENENEDRLSDLPDNVLLHILSFLNTKYAVQTCILSTRWKNLWKHI 68

Query: 114 PILTIKRNLSDPYEVRFSNLDEFKGFVDKVFMLRDDS 4
           P L +       + + F  ++ F   V K+  LRD +
Sbjct: 69  PTLIL-------HCLEFPTMENFTSSVSKILTLRDST 98


>ref|XP_003614107.1| F-box family protein [Medicago truncatula]
           gi|355515442|gb|AES97065.1| F-box family protein
           [Medicago truncatula]
          Length = 439

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/77 (45%), Positives = 47/77 (61%)
 Frame = -2

Query: 234 DFISGLPDSLIHNILSFLDMKLAVQTSILSTRWRYIWTSLPILTIKRNLSDPYEVRFSNL 55
           D +S  PD ++ +ILSFLD K AVQT +LSTRWR +W  +P L +       +  +FS L
Sbjct: 30  DMLSNFPDGILLHILSFLDAKYAVQTCVLSTRWRNLWKLIPTLIL-------HSSKFSTL 82

Query: 54  DEFKGFVDKVFMLRDDS 4
            +F  FV K+  LRD S
Sbjct: 83  KQFSKFVPKILTLRDTS 99


>ref|XP_003614104.1| F-box family protein [Medicago truncatula]
           gi|355515439|gb|AES97062.1| F-box family protein
           [Medicago truncatula]
          Length = 439

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/77 (45%), Positives = 47/77 (61%)
 Frame = -2

Query: 234 DFISGLPDSLIHNILSFLDMKLAVQTSILSTRWRYIWTSLPILTIKRNLSDPYEVRFSNL 55
           D +S  PD ++ +ILSFLD K AVQT +LSTRWR +W  +P L +       +  +FS L
Sbjct: 30  DMLSNFPDGILLHILSFLDAKYAVQTCVLSTRWRNLWKLIPTLIL-------HSSKFSTL 82

Query: 54  DEFKGFVDKVFMLRDDS 4
            +F  FV K+  LRD S
Sbjct: 83  KQFSKFVPKILTLRDTS 99


>ref|XP_003628780.1| F-box family protein [Medicago truncatula]
           gi|355522802|gb|AET03256.1| F-box family protein
           [Medicago truncatula]
          Length = 451

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/92 (41%), Positives = 51/92 (55%)
 Frame = -2

Query: 279 VSKMEETRDSSPNSKDFISGLPDSLIHNILSFLDMKLAVQTSILSTRWRYIWTSLPILTI 100
           + K  +   +   +KD IS LPD ++ +ILS L+ K AVQT+ILSTRW  +W  LP L +
Sbjct: 65  MKKRRKNNHNHTENKDRISDLPDCILFHILSSLETKHAVQTTILSTRWNNLWKRLPTLRL 124

Query: 99  KRNLSDPYEVRFSNLDEFKGFVDKVFMLRDDS 4
             +        F  L  F  FV +V  LRDDS
Sbjct: 125 NSS-------HFKTLKSFTKFVSRVLSLRDDS 149


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