BLASTX nr result
ID: Papaver22_contig00031566
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00031566
(783 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002523094.1| gamma-tubulin complex component, putative [R... 94 7e-42
ref|XP_002320339.1| tubulin gamma complex-associated protein [Po... 96 5e-39
ref|XP_004139048.1| PREDICTED: gamma-tubulin complex component 4... 91 5e-35
ref|XP_002877940.1| tubulin family protein [Arabidopsis lyrata s... 81 5e-32
ref|XP_003536108.1| PREDICTED: gamma-tubulin complex component 4... 116 5e-24
>ref|XP_002523094.1| gamma-tubulin complex component, putative [Ricinus communis]
gi|223537656|gb|EEF39279.1| gamma-tubulin complex
component, putative [Ricinus communis]
Length = 756
Score = 94.4 bits (233), Expect(3) = 7e-42
Identities = 45/68 (66%), Positives = 51/68 (75%), Gaps = 5/68 (7%)
Frame = -1
Query: 423 HQVMYNQLASWMIYVIIQDQHGEFFIRRQEDME-----SSPENFGKSVQKSPDDASLTDW 259
HQVMYNQLASWM+Y I+QDQHGEFFI RQED + + P+ K + S DD SLTDW
Sbjct: 207 HQVMYNQLASWMVYGILQDQHGEFFITRQEDRDLVNSSAQPDMSEKLARLSTDDISLTDW 266
Query: 258 HLGFHIFL 235
HLGFHIFL
Sbjct: 267 HLGFHIFL 274
Score = 70.1 bits (170), Expect(3) = 7e-42
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = -3
Query: 235 ESILFAGKAVRVLRNPSPSFKCQDAISHQLVSRGPQKVQGFTGRFAFHLSP 83
ES+LFAGKA+RVLRNPSP+F+C+D++ +Q V +G Q +QGF GRF P
Sbjct: 287 ESVLFAGKAIRVLRNPSPAFQCKDSLHNQQVPKGGQNIQGFVGRFPVQKEP 337
Score = 53.5 bits (127), Expect(3) = 7e-42
Identities = 23/29 (79%), Positives = 28/29 (96%)
Frame = -1
Query: 87 VQDSSEFHKRSFESAVDAVRVIAASHLWQ 1
+++SSEFHKRSFESAVD++R IAASHLWQ
Sbjct: 364 LKESSEFHKRSFESAVDSIRAIAASHLWQ 392
>ref|XP_002320339.1| tubulin gamma complex-associated protein [Populus trichocarpa]
gi|222861112|gb|EEE98654.1| tubulin gamma
complex-associated protein [Populus trichocarpa]
Length = 728
Score = 95.5 bits (236), Expect(3) = 5e-39
Identities = 46/68 (67%), Positives = 53/68 (77%), Gaps = 5/68 (7%)
Frame = -1
Query: 423 HQVMYNQLASWMIYVIIQDQHGEFFIRRQEDME-----SSPENFGKSVQKSPDDASLTDW 259
HQVMYNQLASW++Y I+QDQHGEFFIRRQED + S+ + K + S DDASLTDW
Sbjct: 197 HQVMYNQLASWVVYGILQDQHGEFFIRRQEDRDVEHGSSNQDMSEKLARLSTDDASLTDW 256
Query: 258 HLGFHIFL 235
HLGFHIFL
Sbjct: 257 HLGFHIFL 264
Score = 61.2 bits (147), Expect(3) = 5e-39
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -3
Query: 235 ESILFAGKAVRVLRNPSPSFKCQDAISHQLVSRGPQKVQGFTGRFAF 95
ESILFAGKA+RVLRNPSP+F+ +D + +Q + +G QK Q TGRF F
Sbjct: 277 ESILFAGKAIRVLRNPSPAFQFKDPVYNQQIPKGAQKNQVSTGRFPF 323
Score = 51.6 bits (122), Expect(3) = 5e-39
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = -1
Query: 87 VQDSSEFHKRSFESAVDAVRVIAASHLWQ 1
+++SSEFHKRSFE AVD++R IAASHLWQ
Sbjct: 354 LKESSEFHKRSFECAVDSIRAIAASHLWQ 382
>ref|XP_004139048.1| PREDICTED: gamma-tubulin complex component 4 homolog [Cucumis
sativus]
Length = 754
Score = 90.5 bits (223), Expect(3) = 5e-35
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 4/67 (5%)
Frame = -1
Query: 423 HQVMYNQLASWMIYVIIQDQHGEFFIRRQEDME----SSPENFGKSVQKSPDDASLTDWH 256
HQVMYNQLASWM+Y ++QD+HGEFFIRRQ+D E SS ++ + + + D SLTDWH
Sbjct: 207 HQVMYNQLASWMVYGLLQDKHGEFFIRRQDDRETNQGSSVQDMSEKLGRLSTDESLTDWH 266
Query: 255 LGFHIFL 235
LGFHI+L
Sbjct: 267 LGFHIYL 273
Score = 53.9 bits (128), Expect(3) = 5e-35
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = -1
Query: 105 DLLFI*VQDSSEFHKRSFESAVDAVRVIAASHLWQ 1
+ + + +++SSEFHKRSFESAVD++R IAASHLWQ
Sbjct: 359 EAMLLDLKESSEFHKRSFESAVDSIRAIAASHLWQ 393
Score = 50.4 bits (119), Expect(3) = 5e-35
Identities = 29/53 (54%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = -3
Query: 235 ESILFAGKAVRVLRNPSPSFKCQDA--ISHQLVSRGPQKVQGFTGRFAFHLSP 83
ESILFAGKA+RVLRNPS +F CQ A SH + R P V+G T F P
Sbjct: 286 ESILFAGKAIRVLRNPSNAFWCQGAGNQSHSNMPRLPLNVKGNTRNFPLQKEP 338
>ref|XP_002877940.1| tubulin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297323778|gb|EFH54199.1| tubulin family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 745
Score = 80.9 bits (198), Expect(3) = 5e-32
Identities = 40/68 (58%), Positives = 46/68 (67%), Gaps = 5/68 (7%)
Frame = -1
Query: 423 HQVMYNQLASWMIYVIIQDQHGEFFIRRQED-----MESSPENFGKSVQKSPDDASLTDW 259
HQVMYNQLA+WM+Y I+QD HGEFFI+RQED S E K + S + SLTDW
Sbjct: 208 HQVMYNQLAAWMVYGILQDPHGEFFIKRQEDGDLDHRSSQEEISEKLARTSVHETSLTDW 267
Query: 258 HLGFHIFL 235
H GFHI L
Sbjct: 268 HSGFHISL 275
Score = 53.5 bits (127), Expect(3) = 5e-32
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = -3
Query: 235 ESILFAGKAVRVLRNPSPSFKCQDAISHQLVSRGPQKVQGF 113
ESILFAGKA+RVLRNPSP+F+ Q S Q G Q++QGF
Sbjct: 288 ESILFAGKAIRVLRNPSPAFQFQKDKSFQQTMGGSQRIQGF 328
Score = 50.4 bits (119), Expect(3) = 5e-32
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = -1
Query: 87 VQDSSEFHKRSFESAVDAVRVIAASHLWQ 1
+++SSEFHKRSFE VD+VR IAASHLWQ
Sbjct: 365 LKESSEFHKRSFECTVDSVRAIAASHLWQ 393
>ref|XP_003536108.1| PREDICTED: gamma-tubulin complex component 4 homolog [Glycine max]
Length = 732
Score = 116 bits (291), Expect = 5e-24
Identities = 80/184 (43%), Positives = 100/184 (54%), Gaps = 43/184 (23%)
Frame = -1
Query: 423 HQVMYNQLASWMIYVIIQDQHGEFFIRRQEDME-----SSPENFGKSVQKSPDDASLTDW 259
HQVMYNQLASW++Y I+QDQ+GEFFIRRQED + S P+ K + S DDASLTDW
Sbjct: 191 HQVMYNQLASWIVYGILQDQYGEFFIRRQEDRDVENSSSHPDISEKLARMSTDDASLTDW 250
Query: 258 HLGFHI---FLSRYF-LLVRQ*GFYETQV--LLSNVRMRFH------------INWYHGD 133
HLGFHI L Y + V + + + +L N F HG
Sbjct: 251 HLGFHISLDMLPEYIPMRVAESILFAGKAVRVLRNPSPSFQSGDAVHPQMPKSFQKIHGL 310
Query: 132 HRRF---------KGLQDDLL-----------FI*VQDSSEFHKRSFESAVDAVRVIAAS 13
RF G+ +DLL + +++SSEFHKRSFE AVD+V+ IAAS
Sbjct: 311 AGRFHFQREPAINMGMGEDLLPQSEADKIEAMLLNLKESSEFHKRSFECAVDSVQAIAAS 370
Query: 12 HLWQ 1
HLWQ
Sbjct: 371 HLWQ 374