BLASTX nr result

ID: Papaver22_contig00031387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00031387
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200915.2| histone deacetylase 18 [Arabidopsis thaliana] g...   113   1e-23
dbj|BAB10370.1| unnamed protein product [Arabidopsis thaliana]        113   1e-23
ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis...   105   5e-21
ref|XP_002305854.1| histone deacetylase [Populus trichocarpa] gi...   103   2e-20
ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus ...   102   2e-20

>ref|NP_200915.2| histone deacetylase 18 [Arabidopsis thaliana]
           gi|75246526|sp|Q8LRK8.1|HDA18_ARATH RecName:
           Full=Histone deacetylase 18
           gi|21105769|gb|AAM34783.1|AF510670_1 HDA18 [Arabidopsis
           thaliana] gi|332010036|gb|AED97419.1| histone
           deacetylase 18 [Arabidopsis thaliana]
          Length = 682

 Score =  113 bits (283), Expect = 1e-23
 Identities = 61/135 (45%), Positives = 88/135 (65%), Gaps = 2/135 (1%)
 Frame = +3

Query: 3   DLILVSAGFDAAKGDPLGQYFVTPYGYYIMIQKLMEL-HGRIVLALEGGYNLVAIADSAF 179
           D+IL+SAGFDAA GDPLG   VTPYGY +M++KLME  HG+IVLALEGGYNL ++  S+ 
Sbjct: 315 DIILLSAGFDAAIGDPLGGCCVTPYGYSVMLKKLMEFAHGKIVLALEGGYNLESLGKSSL 374

Query: 180 ACLKMLFKE-NFPSSEIRLPLSSALKTIEEVHQVLARYWPILDAAEKSEQSKEALPSESA 356
           AC+++L ++     S    PL S  + I+ V + L  YWP LDA+  S ++ +   +E  
Sbjct: 375 ACVQVLLEDKQIHGSSETYPLESTRRVIQAVRERLCTYWPSLDASMASNENLKNPSAERN 434

Query: 357 YKEEMSKKDEEYRKL 401
             + + ++ EE + L
Sbjct: 435 SADALLREVEELKSL 449


>dbj|BAB10370.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1108

 Score =  113 bits (283), Expect = 1e-23
 Identities = 61/135 (45%), Positives = 88/135 (65%), Gaps = 2/135 (1%)
 Frame = +3

Query: 3   DLILVSAGFDAAKGDPLGQYFVTPYGYYIMIQKLMEL-HGRIVLALEGGYNLVAIADSAF 179
           D+IL+SAGFDAA GDPLG   VTPYGY +M++KLME  HG+IVLALEGGYNL ++  S+ 
Sbjct: 315 DIILLSAGFDAAIGDPLGGCCVTPYGYSVMLKKLMEFAHGKIVLALEGGYNLESLGKSSL 374

Query: 180 ACLKMLFKE-NFPSSEIRLPLSSALKTIEEVHQVLARYWPILDAAEKSEQSKEALPSESA 356
           AC+++L ++     S    PL S  + I+ V + L  YWP LDA+  S ++ +   +E  
Sbjct: 375 ACVQVLLEDKQIHGSSETYPLESTRRVIQAVRERLCTYWPSLDASMASNENLKNPSAERN 434

Query: 357 YKEEMSKKDEEYRKL 401
             + + ++ EE + L
Sbjct: 435 SADALLREVEELKSL 449



 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
 Frame = +3

Query: 3    DLILVSAGFDAAKGDPLGQYFVTPYGYYIMIQKLMEL-HGRIVLALEGGYNLVAIADSAF 179
            D+I +SAGFDAA  DPLG   VTPYGY +M++KLME   G+IVLALEGGYNL +IA S+ 
Sbjct: 958  DVIFLSAGFDAAINDPLGGCCVTPYGYSVMLKKLMEFAQGKIVLALEGGYNLDSIAKSSL 1017

Query: 180  ACLKMLFKE 206
            AC+++L ++
Sbjct: 1018 ACVQVLLED 1026


>ref|XP_002280859.2| PREDICTED: histone deacetylase 5-like [Vitis vinifera]
           gi|297733877|emb|CBI15124.3| unnamed protein product
           [Vitis vinifera]
          Length = 646

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/117 (47%), Positives = 78/117 (66%), Gaps = 3/117 (2%)
 Frame = +3

Query: 3   DLILVSAGFDAAKGDPLGQYFVTPYGYYIMIQKLMEL-HGRIVLALEGGYNLVAIADSAF 179
           D++++SAGFDAA GDPLG   VTPYGY +M++KLME   G+I++ALEGGYNLV++A+S  
Sbjct: 267 DIVIISAGFDAAIGDPLGGCHVTPYGYSVMLKKLMEFSEGKIIMALEGGYNLVSLANSVL 326

Query: 180 ACLKMLFKEN-FPSSEIRLPLSSALKTIEEVHQVLARYWPIL-DAAEKSEQSKEALP 344
           AC+++L ++     S    P  S  + I+ V Q L+ +WP L D   K   S +A P
Sbjct: 327 ACVEVLLEDKPIAGSSEAYPFESTWRVIQAVRQELSAFWPTLADELPKKLTSCKASP 383


>ref|XP_002305854.1| histone deacetylase [Populus trichocarpa]
           gi|222848818|gb|EEE86365.1| histone deacetylase [Populus
           trichocarpa]
          Length = 646

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/102 (51%), Positives = 72/102 (70%), Gaps = 2/102 (1%)
 Frame = +3

Query: 3   DLILVSAGFDAAKGDPLGQYFVTPYGYYIMIQKLMEL-HGRIVLALEGGYNLVAIADSAF 179
           D+I+VSAGFDAA GDPLG   VTPYGY +M++KLM+   G+I+LALEGGYNL +IA+S  
Sbjct: 263 DMIIVSAGFDAAVGDPLGGCCVTPYGYSVMLKKLMDFAQGKIMLALEGGYNLDSIANSFL 322

Query: 180 ACLKMLFKENFPSSEIR-LPLSSALKTIEEVHQVLARYWPIL 302
           AC+K+L ++   S  +   P  S  + I+ V + L+ YWP L
Sbjct: 323 ACMKVLLEDKPVSGSVEAYPFESTWRVIQAVRKKLSPYWPAL 364


>ref|XP_002514660.1| histone deacetylase hda1, putative [Ricinus communis]
           gi|223546264|gb|EEF47766.1| histone deacetylase hda1,
           putative [Ricinus communis]
          Length = 654

 Score =  102 bits (255), Expect = 2e-20
 Identities = 57/138 (41%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
 Frame = +3

Query: 3   DLILVSAGFDAAKGDPLGQYFVTPYGYYIMIQKLMEL-HGRIVLALEGGYNLVAIADSAF 179
           D+I++SAGFDAA GDPLG   +TPYGY +M++KLM+  +G+IVLALEGGYNL +IA+S F
Sbjct: 270 DMIIISAGFDAAVGDPLGGCRITPYGYSVMLKKLMDFANGKIVLALEGGYNLESIANSFF 329

Query: 180 ACLKMLFKEN-FPSSEIRLPLSSALKTIEEVHQVLARYWPILDAAEKSEQSKEALPSESA 356
           AC+++L +      S    P  S  + I+ V + L+ YW  L      + + +  P    
Sbjct: 330 ACMEVLLESKPIAGSSEAYPFESTWRVIQAVRKKLSGYWATLADELPLKLTSQKGPPAHL 389

Query: 357 YKEEMSKKDEEYRKLQQV 410
                  +DE+ R L  V
Sbjct: 390 LISSSDSEDEDDRTLNNV 407


Top