BLASTX nr result

ID: Papaver22_contig00031041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00031041
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    69   4e-10
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...    69   4e-10
ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    57   1e-06
gb|EEE69906.1| hypothetical protein OsJ_29747 [Oryza sativa Japo...    57   2e-06

>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
           42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/89 (37%), Positives = 52/89 (58%)
 Frame = +1

Query: 262 GTTRGMVLAWSAKIDLQILHTSDNQIDVIIIDKTRNLVWMLSAVYGCPYKVKKHARWNYF 441
           G + G+ L W   + L  L+  D  IDV I     N+ + LS VYG P + ++H+ W +F
Sbjct: 444 GHSGGLALLWKDSVRLSNLYQDDRHIDVHI--SINNINFYLSRVYGHPCQSERHSLWTHF 501

Query: 442 RELARTIEIPWLVLGDLNFVLTDNEMIRG 528
             L++T   PW+++GD N +L++NE I G
Sbjct: 502 ENLSKTRNDPWILIGDFNEILSNNEKIGG 530


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
           putative protein [Arabidopsis thaliana]
          Length = 1294

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/89 (37%), Positives = 52/89 (58%)
 Frame = +1

Query: 262 GTTRGMVLAWSAKIDLQILHTSDNQIDVIIIDKTRNLVWMLSAVYGCPYKVKKHARWNYF 441
           G + G+ L W   + L  L+  D  IDV I     N+ + LS VYG P + ++H+ W +F
Sbjct: 424 GHSGGLALLWKDSVRLSNLYQDDRHIDVHI--SINNINFYLSRVYGHPCQSERHSLWTHF 481

Query: 442 RELARTIEIPWLVLGDLNFVLTDNEMIRG 528
             L++T   PW+++GD N +L++NE I G
Sbjct: 482 ENLSKTRNDPWILIGDFNEILSNNEKIGG 510


>ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|222842328|gb|EEE79875.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/86 (30%), Positives = 47/86 (54%)
 Frame = +1

Query: 259 IGTTRGMVLAWSAKIDLQILHTSDNQIDVIIIDKTRNLVWMLSAVYGCPYKVKKHARWNY 438
           +G   G+ + W +   + +L  S+N ID+++++   N +W  +  YG P + +K   WN 
Sbjct: 47  LGRGGGLAVLWRSSASVSLLGYSNNHIDLLVVE-ANNFIWRFTGYYGLPDRNRKMESWNL 105

Query: 439 FRELARTIEIPWLVLGDLNFVLTDNE 516
            R L+R   +PW+ +GD N +L   E
Sbjct: 106 LRALSRQSALPWVCMGDYNDMLCAEE 131


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/86 (33%), Positives = 44/86 (51%)
 Frame = +1

Query: 259 IGTTRGMVLAWSAKIDLQILHTSDNQIDVIIIDKTRNLVWMLSAVYGCPYKVKKHARWNY 438
           I T RG+ L W   + + IL +S N +D ++   +   V  ++ +YG P+  +K A W  
Sbjct: 666 IATGRGLALFWGDAVQVSILDSSPNYVDTVVSFLSDAFVCKITWMYGNPHDNEKRAFWRL 725

Query: 439 FRELARTIEIPWLVLGDLNFVLTDNE 516
                    +PWLVLGD N VL  +E
Sbjct: 726 MYSRFPVQSLPWLVLGDFNEVLDPSE 751


>gb|EEE69906.1| hypothetical protein OsJ_29747 [Oryza sativa Japonica Group]
          Length = 1139

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/85 (28%), Positives = 45/85 (52%)
 Frame = +1

Query: 262 GTTRGMVLAWSAKIDLQILHTSDNQIDVIIIDKTRNLVWMLSAVYGCPYKVKKHARWNYF 441
           G   G+ L W   + +++L+ ++  ID  +       +W ++ VYG P    +H  W+  
Sbjct: 487 GMCGGLALFWHETVYVEVLNMNERHIDAYVRMTVDGPLWHVTFVYGEPCVENRHRMWSLL 546

Query: 442 RELARTIEIPWLVLGDLNFVLTDNE 516
            ++ ++ ++PWLV+GD N VL   E
Sbjct: 547 EDIRQSSDLPWLVMGDFNEVLWQYE 571


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