BLASTX nr result
ID: Papaver22_contig00031041
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver22_contig00031041 (533 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 69 4e-10 emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 69 4e-10 ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|2... 62 4e-08 gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 57 1e-06 gb|EEE69906.1| hypothetical protein OsJ_29747 [Oryza sativa Japo... 57 2e-06 >gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score: 42.57) [Arabidopsis thaliana] Length = 1662 Score = 68.9 bits (167), Expect = 4e-10 Identities = 33/89 (37%), Positives = 52/89 (58%) Frame = +1 Query: 262 GTTRGMVLAWSAKIDLQILHTSDNQIDVIIIDKTRNLVWMLSAVYGCPYKVKKHARWNYF 441 G + G+ L W + L L+ D IDV I N+ + LS VYG P + ++H+ W +F Sbjct: 444 GHSGGLALLWKDSVRLSNLYQDDRHIDVHI--SINNINFYLSRVYGHPCQSERHSLWTHF 501 Query: 442 RELARTIEIPWLVLGDLNFVLTDNEMIRG 528 L++T PW+++GD N +L++NE I G Sbjct: 502 ENLSKTRNDPWILIGDFNEILSNNEKIGG 530 >emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1| putative protein [Arabidopsis thaliana] Length = 1294 Score = 68.9 bits (167), Expect = 4e-10 Identities = 33/89 (37%), Positives = 52/89 (58%) Frame = +1 Query: 262 GTTRGMVLAWSAKIDLQILHTSDNQIDVIIIDKTRNLVWMLSAVYGCPYKVKKHARWNYF 441 G + G+ L W + L L+ D IDV I N+ + LS VYG P + ++H+ W +F Sbjct: 424 GHSGGLALLWKDSVRLSNLYQDDRHIDVHI--SINNINFYLSRVYGHPCQSERHSLWTHF 481 Query: 442 RELARTIEIPWLVLGDLNFVLTDNEMIRG 528 L++T PW+++GD N +L++NE I G Sbjct: 482 ENLSKTRNDPWILIGDFNEILSNNEKIGG 510 >ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|222842328|gb|EEE79875.1| predicted protein [Populus trichocarpa] Length = 366 Score = 62.4 bits (150), Expect = 4e-08 Identities = 26/86 (30%), Positives = 47/86 (54%) Frame = +1 Query: 259 IGTTRGMVLAWSAKIDLQILHTSDNQIDVIIIDKTRNLVWMLSAVYGCPYKVKKHARWNY 438 +G G+ + W + + +L S+N ID+++++ N +W + YG P + +K WN Sbjct: 47 LGRGGGLAVLWRSSASVSLLGYSNNHIDLLVVE-ANNFIWRFTGYYGLPDRNRKMESWNL 105 Query: 439 FRELARTIEIPWLVLGDLNFVLTDNE 516 R L+R +PW+ +GD N +L E Sbjct: 106 LRALSRQSALPWVCMGDYNDMLCAEE 131 >gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa] Length = 1656 Score = 57.4 bits (137), Expect = 1e-06 Identities = 29/86 (33%), Positives = 44/86 (51%) Frame = +1 Query: 259 IGTTRGMVLAWSAKIDLQILHTSDNQIDVIIIDKTRNLVWMLSAVYGCPYKVKKHARWNY 438 I T RG+ L W + + IL +S N +D ++ + V ++ +YG P+ +K A W Sbjct: 666 IATGRGLALFWGDAVQVSILDSSPNYVDTVVSFLSDAFVCKITWMYGNPHDNEKRAFWRL 725 Query: 439 FRELARTIEIPWLVLGDLNFVLTDNE 516 +PWLVLGD N VL +E Sbjct: 726 MYSRFPVQSLPWLVLGDFNEVLDPSE 751 >gb|EEE69906.1| hypothetical protein OsJ_29747 [Oryza sativa Japonica Group] Length = 1139 Score = 56.6 bits (135), Expect = 2e-06 Identities = 24/85 (28%), Positives = 45/85 (52%) Frame = +1 Query: 262 GTTRGMVLAWSAKIDLQILHTSDNQIDVIIIDKTRNLVWMLSAVYGCPYKVKKHARWNYF 441 G G+ L W + +++L+ ++ ID + +W ++ VYG P +H W+ Sbjct: 487 GMCGGLALFWHETVYVEVLNMNERHIDAYVRMTVDGPLWHVTFVYGEPCVENRHRMWSLL 546 Query: 442 RELARTIEIPWLVLGDLNFVLTDNE 516 ++ ++ ++PWLV+GD N VL E Sbjct: 547 EDIRQSSDLPWLVMGDFNEVLWQYE 571