BLASTX nr result

ID: Papaver22_contig00031020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00031020
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07

>ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Cucumis sativus]
            gi|449499902|ref|XP_004160949.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Cucumis sativus]
          Length = 860

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
 Frame = +3

Query: 3    TDLFRRNSERISEGVLQKLLDTLQCSEVVQEATVSNFSKSLISLCESSASKDSTGLIGPS 182
            T+LF  N++RI    L++LL  L   +   EATVSN S+SL SLC+    ++++  +   
Sbjct: 673  TELFEGNTDRIRRNNLKQLLHALGDCDA-SEATVSNLSRSLQSLCKFDIPENTSQSVACD 731

Query: 183  DGASDKSPIVDRDEHS--------------INVQDGSPDLYENP--KMGITSNSLFDSAP 314
              A+D+  + D +                 I V   S ++  N   KM   S S+ D A 
Sbjct: 732  HDATDELQLPDSENMENMKLHPDEDESLDIIPVDHASLNMKVNSESKMSPWSVSISDGAL 791

Query: 315  GIQD--------------CYDNESIEVTLDLLTCDSNKLDKSGPPPASEILGTWKERRNK 452
            G                 C ++E  E  L+ L  + +    S  P  +EIL TWKE R  
Sbjct: 792  GTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSNLPAVNEILETWKEERKA 851

Query: 453  EGIFL 467
            +G+FL
Sbjct: 852  DGLFL 856


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