BLASTX nr result

ID: Papaver22_contig00030881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00030881
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238343.1| transcription initiation factor IIB [Glycine...   296   4e-78
gb|ABR16853.1| unknown [Picea sitchensis]                             296   4e-78
ref|XP_002284342.1| PREDICTED: transcription initiation factor I...   295   5e-78
ref|XP_002534470.1| transcription initiation factor iib, putativ...   295   7e-78
dbj|BAJ53205.1| JHL06B08.6 [Jatropha curcas]                          294   1e-77

>ref|NP_001238343.1| transcription initiation factor IIB [Glycine max]
           gi|1351222|sp|P48513.1|TF2B_SOYBN RecName:
           Full=Transcription initiation factor IIB; AltName:
           Full=General transcription factor TFIIB
           gi|945087|gb|AAB09756.1| transcription factor TFIIB
           [Glycine max]
          Length = 313

 Score =  296 bits (757), Expect = 4e-78
 Identities = 153/257 (59%), Positives = 202/257 (78%), Gaps = 8/257 (3%)
 Frame = +3

Query: 3   TSEWRTFANETADNDPNRVGEKSNPLLTNSGLTTKISMPKGGVN----RSSIGRFRKIDT 170
           TSEWRTFANE+ DNDPNRVG  SNPLLT+ GL+T I+ P GG       SS+GR++   +
Sbjct: 41  TSEWRTFANESGDNDPNRVGGPSNPLLTDGGLSTVIAKPNGGGGGEFLSSSLGRWQNRGS 100

Query: 171 PDPDKGLIEAFKAIGVMSERLGLVSTIKDLANEIYKKMEDVKGSKGRNKDALMAACLYTA 350
            +PD+ LI+AFK I  MS+RLGLV+TIKD ANEIYK++ED K S+GRN+DAL+AACLY A
Sbjct: 101 -NPDRALIQAFKTIATMSDRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIA 159

Query: 351 CKRLEKPRTMKEIHSVANGATRKEIGRAKLDISKHL----EDSRDEGCTKPVEFVKRFCS 518
           C++ +KPRT+KEI SVANGAT+KEIGRAK  I K L     ++ + G     +F++RFCS
Sbjct: 160 CRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLENGNAVEMGTIHAGDFMRRFCS 219

Query: 519 NLGMSNKASKAAQEAVDKTADCDIRRNPITVAASIIYMIAQLSGERRHIPDVSDATGVAQ 698
           NL M+N+A KAAQEAV K+ + DIRR+PI++AA++IY+I QLS +++ + D+S ATGVA+
Sbjct: 220 NLCMNNQAVKAAQEAVQKSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAE 279

Query: 699 GTIRSSYKDIYPHAAKL 749
           GTIR+SYKD+YPH +K+
Sbjct: 280 GTIRNSYKDLYPHVSKI 296


>gb|ABR16853.1| unknown [Picea sitchensis]
          Length = 313

 Score =  296 bits (757), Expect = 4e-78
 Identities = 155/256 (60%), Positives = 200/256 (78%), Gaps = 7/256 (2%)
 Frame = +3

Query: 3   TSEWRTFANETADNDPNRVGEKSNPLLTNSGLTTKISMPKGGVN---RSSIGRFRKIDTP 173
           TSEWRTFANET DNDP RVG  SNPLLT+ GL+T IS P G       SS+GR++   + 
Sbjct: 42  TSEWRTFANETGDNDPVRVGGPSNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGS- 100

Query: 174 DPDKGLIEAFKAIGVMSERLGLVSTIKDLANEIYKKMEDVKGSKGRNKDALMAACLYTAC 353
           +PD+ LI AFK IG MS+RLGLV+TIKD ANEIYKK+ED K  +GRN+DA++AACLY AC
Sbjct: 101 NPDRSLIMAFKTIGTMSDRLGLVATIKDRANEIYKKVEDSKSIRGRNQDAILAACLYIAC 160

Query: 354 KRLEKPRTMKEIHSVANGATRKEIGRAKLDISKHLED----SRDEGCTKPVEFVKRFCSN 521
           ++ +KPRT+KEI SVANGA++KE+GRAK  I K LE+    S + G     +F++RFCS+
Sbjct: 161 RQEDKPRTVKEICSVANGASKKEVGRAKEFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSH 220

Query: 522 LGMSNKASKAAQEAVDKTADCDIRRNPITVAASIIYMIAQLSGERRHIPDVSDATGVAQG 701
           LGM ++A KAA EAV K+ + DIRR+PI++AA+ IYMI+QLS E++ + D+S ATGVA+G
Sbjct: 221 LGMGHQAVKAATEAVKKSEELDIRRSPISIAAAAIYMISQLSEEKKLLRDISRATGVAEG 280

Query: 702 TIRSSYKDIYPHAAKL 749
           TIR+SYKD+YPHAA+L
Sbjct: 281 TIRNSYKDLYPHAARL 296


>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|297739630|emb|CBI29812.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  295 bits (756), Expect = 5e-78
 Identities = 154/256 (60%), Positives = 200/256 (78%), Gaps = 7/256 (2%)
 Frame = +3

Query: 3   TSEWRTFANETADNDPNRVGEKSNPLLTNSGLTTKISMPKGGVN---RSSIGRFRKIDTP 173
           TSEWRTFANE+ DNDP RVG  SNPLLT+ GL+T I+ P G       SS+GR++   + 
Sbjct: 41  TSEWRTFANESGDNDPVRVGGPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGS- 99

Query: 174 DPDKGLIEAFKAIGVMSERLGLVSTIKDLANEIYKKMEDVKGSKGRNKDALMAACLYTAC 353
           +PD+GLI AFK I  MS+RLGLV+TIKD ANEIYKK+ED K ++GRN+DAL+AACLY AC
Sbjct: 100 NPDRGLILAFKTIATMSDRLGLVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIAC 159

Query: 354 KRLEKPRTMKEIHSVANGATRKEIGRAKLDISKHLE----DSRDEGCTKPVEFVKRFCSN 521
           ++ +KPRT+KEI SVANGAT+KEIGRAK  I K LE     S + G     +F++RFCSN
Sbjct: 160 RQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSN 219

Query: 522 LGMSNKASKAAQEAVDKTADCDIRRNPITVAASIIYMIAQLSGERRHIPDVSDATGVAQG 701
           LGM+N+  KAAQEAV K+ + DIRR+P+++AA++IY+I QLS E++ + D+S ATGVA+G
Sbjct: 220 LGMTNQVVKAAQEAVQKSEEFDIRRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEG 279

Query: 702 TIRSSYKDIYPHAAKL 749
           TIR+SYKD+YPH +K+
Sbjct: 280 TIRNSYKDLYPHISKI 295


>ref|XP_002534470.1| transcription initiation factor iib, putative [Ricinus communis]
           gi|223525233|gb|EEF27913.1| transcription initiation
           factor iib, putative [Ricinus communis]
          Length = 312

 Score =  295 bits (755), Expect = 7e-78
 Identities = 153/256 (59%), Positives = 200/256 (78%), Gaps = 7/256 (2%)
 Frame = +3

Query: 3   TSEWRTFANETADNDPNRVGEKSNPLLTNSGLTTKISMPKGGVNR---SSIGRFRKIDTP 173
           TSEWRTFANE+ DNDP RVG  +NPLL + GL+T I+ P G       SS+GR++   + 
Sbjct: 41  TSEWRTFANESGDNDPVRVGGPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGS- 99

Query: 174 DPDKGLIEAFKAIGVMSERLGLVSTIKDLANEIYKKMEDVKGSKGRNKDALMAACLYTAC 353
           +PD+GLI AFK I  MS+RLGLV+TIKD ANEIYKK+ED K S+GRN+DAL+AACLY AC
Sbjct: 100 NPDRGLILAFKTIATMSDRLGLVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIAC 159

Query: 354 KRLEKPRTMKEIHSVANGATRKEIGRAKLDISKHL----EDSRDEGCTKPVEFVKRFCSN 521
           ++ +KPRT+KEI SVANGAT+KEIGRAK  I K L      S + G     +F++RFCSN
Sbjct: 160 RQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSN 219

Query: 522 LGMSNKASKAAQEAVDKTADCDIRRNPITVAASIIYMIAQLSGERRHIPDVSDATGVAQG 701
           LGM+N+A KAAQEAV K+ + DIRR+PI++AA++IY+I+QLS +++ + D+S ATGVA+G
Sbjct: 220 LGMNNQAMKAAQEAVQKSEEFDIRRSPISIAAAVIYIISQLSDDKKLLRDISHATGVAEG 279

Query: 702 TIRSSYKDIYPHAAKL 749
           TIR+SYKD+YPH +K+
Sbjct: 280 TIRNSYKDLYPHVSKI 295


>dbj|BAJ53205.1| JHL06B08.6 [Jatropha curcas]
          Length = 312

 Score =  294 bits (753), Expect = 1e-77
 Identities = 152/256 (59%), Positives = 200/256 (78%), Gaps = 7/256 (2%)
 Frame = +3

Query: 3   TSEWRTFANETADNDPNRVGEKSNPLLTNSGLTTKISMPKGGVNR---SSIGRFRKIDTP 173
           TSEWRTFANE+ DNDP RVG  +NPLL + GL+T I+ P G       SS+GR++   + 
Sbjct: 41  TSEWRTFANESGDNDPVRVGGPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGS- 99

Query: 174 DPDKGLIEAFKAIGVMSERLGLVSTIKDLANEIYKKMEDVKGSKGRNKDALMAACLYTAC 353
           +PD+GLI AFK I  MS+RLGLV+TIKD ANEIYKK+ED K S+GRN+DAL+AACLY AC
Sbjct: 100 NPDRGLILAFKTIATMSDRLGLVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIAC 159

Query: 354 KRLEKPRTMKEIHSVANGATRKEIGRAKLDISKHL----EDSRDEGCTKPVEFVKRFCSN 521
           ++ +KPRT+KEI SVANGAT+KEIGRAK  I K L      S + G     +F++RFCSN
Sbjct: 160 RQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSN 219

Query: 522 LGMSNKASKAAQEAVDKTADCDIRRNPITVAASIIYMIAQLSGERRHIPDVSDATGVAQG 701
           LGM+N+A KAAQEAV K+ + DIRR+PI++AA++IY+I+QLS +++ + ++S ATGVA+G
Sbjct: 220 LGMNNQAMKAAQEAVQKSEEFDIRRSPISIAAAVIYIISQLSDDKKPLREISQATGVAEG 279

Query: 702 TIRSSYKDIYPHAAKL 749
           TIR+SYKD+YPH +K+
Sbjct: 280 TIRNSYKDLYPHVSKI 295


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