BLASTX nr result

ID: Papaver22_contig00030850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00030850
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   148   7e-34
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   148   7e-34
ref|XP_003516687.1| PREDICTED: DNA-directed RNA polymerase D sub...   145   7e-33
ref|XP_003538711.1| PREDICTED: DNA-directed RNA polymerase D sub...   144   1e-32
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   135   6e-30

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  148 bits (374), Expect = 7e-34
 Identities = 76/161 (47%), Positives = 102/161 (63%)
 Frame = +1

Query: 70   VREDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 249
            V ED   L+   ++QLEM   +  +SPAI+KAP     +WTGKQL SML+P  FN+ FP+
Sbjct: 535  VMEDGVLLNLFQMQQLEMFCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPL 594

Query: 250  NXXXXXXXXXXXXXXXXAWLQDTDDSIYSTLVRNYGDKTLDILFSAQEILLEWISMRGFS 429
            N                AWL+D D +++S+LV++   K LD L++AQE+L EW+SMRG S
Sbjct: 595  NGVRISDGELISSSDGSAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLS 654

Query: 430  VSLSDIYLSSNSCSRGNMVEEVSMGLQEATQAFRTKDFLIN 552
            VSLSDIYLSS+S SR NM++EV  GL  A Q    K  L++
Sbjct: 655  VSLSDIYLSSDSISRKNMIDEVFCGLLVAEQTCHFKQLLVD 695


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  148 bits (374), Expect = 7e-34
 Identities = 76/161 (47%), Positives = 102/161 (63%)
 Frame = +1

Query: 70  VREDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 249
           V ED   L+   ++QLEM   +  +SPAI+KAP     +WTGKQL SML+P  FN+ FP+
Sbjct: 505 VMEDGVLLNLFQMQQLEMFCPYQLQSPAIIKAPLLDTQVWTGKQLFSMLLPPGFNYVFPL 564

Query: 250 NXXXXXXXXXXXXXXXXAWLQDTDDSIYSTLVRNYGDKTLDILFSAQEILLEWISMRGFS 429
           N                AWL+D D +++S+LV++   K LD L++AQE+L EW+SMRG S
Sbjct: 565 NGVRISDGELISSSDGSAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLS 624

Query: 430 VSLSDIYLSSNSCSRGNMVEEVSMGLQEATQAFRTKDFLIN 552
           VSLSDIYLSS+S SR NM++EV  GL  A Q    K  L++
Sbjct: 625 VSLSDIYLSSDSISRKNMIDEVFCGLLVAEQTCHFKQLLVD 665


>ref|XP_003516687.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Glycine max]
          Length = 1622

 Score =  145 bits (365), Expect = 7e-33
 Identities = 75/176 (42%), Positives = 114/176 (64%), Gaps = 4/176 (2%)
 Frame = +1

Query: 76   EDEACLHQRPIEQLEMLASHHFR--SPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 249
            ED   L+   ++QL+ML+  + R   PA+VKAP+   S+W GKQL SML+P DF++ FP 
Sbjct: 500  EDGVLLNVYQMQQLQMLSISNKRLIPPAVVKAPSSNSSLWNGKQLFSMLLPYDFDYSFPS 559

Query: 250  NXXXXXXXXXXXXXXXXAWLQDTDDSIYSTLVRNYGDKTLDILFSAQEILLEWISMRGFS 429
            +                 WL+D+D +++ +LV +Y  KTL+ L++AQ++L EW+SM GFS
Sbjct: 560  DGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLSMTGFS 619

Query: 430  VSLSDIYLSSNSCSRGNMVEEVSMGLQEATQAFRTKDFLINRMC--MENLLRDSED 591
            VSLSD+YLSS+S +R NM+EE+  GLQ+A +A   K  L++  C  +   L++SE+
Sbjct: 620  VSLSDLYLSSDSYARENMIEEIFYGLQDAERACNFKQLLLDYYCDFLSGSLQESEN 675


>ref|XP_003538711.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Glycine max]
          Length = 1461

 Score =  144 bits (363), Expect = 1e-32
 Identities = 74/176 (42%), Positives = 114/176 (64%), Gaps = 4/176 (2%)
 Frame = +1

Query: 76   EDEACLHQRPIEQLEMLASHHFR--SPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 249
            ED   L+   ++QL+ML+    R   PA+VKAP+   S+W+GKQ+ SML+P DF++ FP 
Sbjct: 507  EDGVLLNVYQMQQLQMLSISDKRLIPPAVVKAPSSNSSLWSGKQIFSMLLPYDFDYSFPS 566

Query: 250  NXXXXXXXXXXXXXXXXAWLQDTDDSIYSTLVRNYGDKTLDILFSAQEILLEWISMRGFS 429
            +                 WL+D+D +++ +LV +Y  KTL+ L++AQ++L EW+SM GFS
Sbjct: 567  DGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQGKTLNFLYTAQKVLCEWLSMTGFS 626

Query: 430  VSLSDIYLSSNSCSRGNMVEEVSMGLQEATQAFRTKDFLINRMC--MENLLRDSED 591
            VSLSD+YLSS+S +R NM+EE+  GLQ+A QA   K  L++  C  +   +++SE+
Sbjct: 627  VSLSDLYLSSDSYARKNMIEEIFYGLQDAEQACNFKQLLLDCYCDFLSGSIQESEN 682


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 1475

 Score =  135 bits (340), Expect = 6e-30
 Identities = 73/183 (39%), Positives = 106/183 (57%)
 Frame = +1

Query: 70   VREDEACLHQRPIEQLEMLASHHFRSPAIVKAPNFQRSMWTGKQLLSMLMPQDFNFDFPV 249
            V ED   L  + ++QL+M   H   SPA+ KAP+     WTGKQL+SML+P+ F+ + P 
Sbjct: 508  VMEDGVLLSLQQMQQLQMFCPHQLFSPAVRKAPSLNGCAWTGKQLISMLLPRGFDHECPS 567

Query: 250  NXXXXXXXXXXXXXXXXAWLQDTDDSIYSTLVRNYGDKTLDILFSAQEILLEWISMRGFS 429
            +                 WL+DTD +++ +L++   D+ LD L+ AQE+L EW+SMRG S
Sbjct: 568  SDVYIRDGELISSEGSF-WLRDTDGNLFQSLIKQCQDQVLDFLYIAQEVLCEWLSMRGLS 626

Query: 430  VSLSDIYLSSNSCSRGNMVEEVSMGLQEATQAFRTKDFLINRMCMENLLRDSEDTHNCET 609
            VSLSD+YL  +S SR NM++EV  GLQ+A      K F+++  C + L    ED      
Sbjct: 627  VSLSDLYLCPDSDSRENMMDEVLFGLQDAKGTCNMKQFMVD-SCRDFLASIDEDEQYSVN 685

Query: 610  FEV 618
            F+V
Sbjct: 686  FDV 688


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