BLASTX nr result

ID: Papaver22_contig00030836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00030836
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF43043.1|AF236059_1 putative Myb-related domain, partial [P...    95   7e-18

>gb|AAF43043.1|AF236059_1 putative Myb-related domain, partial [Papaver rhoeas]
          Length = 566

 Score = 95.1 bits (235), Expect = 7e-18
 Identities = 58/127 (45%), Positives = 79/127 (62%), Gaps = 2/127 (1%)
 Frame = +3

Query: 3   ISVPVTGSFDQETTDLTSVSSPTICVPPPCI--NSLVSQRVKSVLKDAAQNFSNLPSILS 176
           ++VPV+     E +D  SV SP+  + PP I  N L  Q  +S+LK+AA++F N PSIL 
Sbjct: 379 MAVPVSSPSLFEMSDSNSVLSPSSFLTPPRIRNNGLDLQSAESILKNAAKSFQNTPSILR 438

Query: 177 KRKRQATGTRNRNEHIKQVQDEESSHSLELEKADNSKEKPASMVVNLENENTSCHENSTI 356
           KR+R+A GT NR      +  E+  HSLE EK ++ KE P SM    E+ +++   NSTI
Sbjct: 439 KRRREAGGTPNRIVQTNGLTAEDKLHSLEREKIEDCKETPGSM----ESNSSTGRVNSTI 494

Query: 357 RLFYTRK 377
           RLFYTRK
Sbjct: 495 RLFYTRK 501


Top