BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00030792
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   247   3e-63
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                245   8e-63
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   239   5e-61
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   239   7e-61
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   238   9e-61

>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  247 bits (630), Expect = 3e-63
 Identities = 121/276 (43%), Positives = 184/276 (66%), Gaps = 1/276 (0%)
 Frame = +2

Query: 2    ISCYNVIYKCITKILAVRMKTILRTIISAK*SEFISGRSIQDNVLVAHELVKNYHRP-LS 178
            ISC NV+YK I+KI+A R+K +L   I+   S F+  R + +N+L+A ELVK+YH+  +S
Sbjct: 532  ISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTIS 591

Query: 179  ARCALKIDLTKAYVTVN*KIICVSLQKFGFPSMFIHWVQLCLSTAKFSIMINGAPYGFFG 358
             RCA+KID++KA+ +V    +       GFP  FIHW+ +C++TA FS+ +NG   G+F 
Sbjct: 592  TRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQ 651

Query: 359  SKRGIRQGCPLSPYIFVMVMEVFNSILQAQVDHGLFGFHPKCKSTRLTHLYFADDVMVFF 538
            S RG+RQGC LSPY+FV+ M+V + +L        FG+HPKCK+  LTHL FADD+MV  
Sbjct: 652  SSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLS 711

Query: 539  KGTLEAATVLKCGLERFSACSGLEVNVKKTSLFCSGVSIEEKTLLLCCLGCSEGTLPVTY 718
             G + +   +    + F+  SGL ++++K++++ +G+S   +  +      S G LPV Y
Sbjct: 712  DGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRY 771

Query: 719  LGIPLISTRISYTNCLPLLERVIKKVHSWKTKFLAY 826
            LG+PLI+ R+S T+CLPLLE+V K++ SW ++FL+Y
Sbjct: 772  LGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSY 807


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  245 bits (626), Expect = 8e-63
 Identities = 122/276 (44%), Positives = 182/276 (65%), Gaps = 1/276 (0%)
 Frame = +2

Query: 2   ISCYNVIYKCITKILAVRMKTILRTIISAK*SEFISGRSIQDNVLVAHELVKNYHRP-LS 178
           ISC NVIYK I+KI+A R+K +L T I    S F+  R + +NVL+A ELVK+YH+  +S
Sbjct: 105 ISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSIS 164

Query: 179 ARCALKIDLTKAYVTVN*KIICVSLQKFGFPSMFIHWVQLCLSTAKFSIMINGAPYGFFG 358
            RCA+KID++KA+ +V  + +  +L+   FP  F HW++LC+STA FS+ +NG   GFFG
Sbjct: 165 PRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFG 224

Query: 359 SKRGIRQGCPLSPYIFVMVMEVFNSILQAQVDHGLFGFHPKCKSTRLTHLYFADDVMVFF 538
           SKRG+RQGC LSPY+FV+ M V + ++     H   G+HPKCK   LTHL FADD+MVF 
Sbjct: 225 SKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFI 284

Query: 539 KGTLEAATVLKCGLERFSACSGLEVNVKKTSLFCSGVSIEEKTLLLCCLGCSEGTLPVTY 718
            G   +   +    + F+  SGL ++++K++L+ +GVS   +  +L     + G LPV Y
Sbjct: 285 DGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRY 344

Query: 719 LGIPLISTRISYTNCLPLLERVIKKVHSWKTKFLAY 826
           LG+PL++ +++  +  PLL++V  K+ SW  + L+Y
Sbjct: 345 LGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSY 380


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  239 bits (610), Expect = 5e-61
 Identities = 120/276 (43%), Positives = 179/276 (64%), Gaps = 1/276 (0%)
 Frame = +2

Query: 2    ISCYNVIYKCITKILAVRMKTILRTIISAK*SEFISGRSIQDNVLVAHELVKNYHRP-LS 178
            ISC NVIYK I+KI+A R+K +L T I    S F+  R + +NVL+A ELVK+YH+  +S
Sbjct: 674  ISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLMENVLLATELVKDYHKDSIS 733

Query: 179  ARCALKIDLTKAYVTVN*KIICVSLQKFGFPSMFIHWVQLCLSTAKFSIMINGAPYGFFG 358
             RCA+KID++KA+ +V  + +  +L+   FP  F HW++LC+STA FS+ +N    GFFG
Sbjct: 734  PRCAMKIDISKAFDSVQWQFLLNTLEALKFPEKFRHWIKLCISTATFSVQVNSEQAGFFG 793

Query: 359  SKRGIRQGCPLSPYIFVMVMEVFNSILQAQVDHGLFGFHPKCKSTRLTHLYFADDVMVFF 538
            SKRG+RQGC LSPY+FV+ M V + ++     H   G+HPKCK   LTHL FADD+MVF 
Sbjct: 794  SKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFI 853

Query: 539  KGTLEAATVLKCGLERFSACSGLEVNVKKTSLFCSGVSIEEKTLLLCCLGCSEGTLPVTY 718
             G   +   +    + F+  SGL ++++K++L+ + VS   +  +L     + G LPV Y
Sbjct: 854  DGQQRSVEGVINIFKDFAGKSGLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPVRY 913

Query: 719  LGIPLISTRISYTNCLPLLERVIKKVHSWKTKFLAY 826
            LG PL++ +++  +  PLL++V  K+ SW  + L+Y
Sbjct: 914  LGFPLLTKQMTTADYSPLLDKVRSKISSWTARSLSY 949


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  239 bits (609), Expect = 7e-61
 Identities = 117/276 (42%), Positives = 184/276 (66%), Gaps = 1/276 (0%)
 Frame = +2

Query: 2    ISCYNVIYKCITKILAVRMKTILRTIISAK*SEFISGRSIQDNVLVAHELVKNYHRP-LS 178
            ISC NV+YK ++K++A R+K IL   I+   S FI  R + +N+L+A ELVK+YH+  +S
Sbjct: 679  ISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVKDYHKESIS 738

Query: 179  ARCALKIDLTKAYVTVN*KIICVSLQKFGFPSMFIHWVQLCLSTAKFSIMINGAPYGFFG 358
            +R ALKID++KA+  V    +   L+    P MFIHW++LC+ TA FS+ +NG   GFF 
Sbjct: 739  SRSALKIDISKAFDFVQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVNGELSGFFR 798

Query: 359  SKRGIRQGCPLSPYIFVMVMEVFNSILQAQVDHGLFGFHPKCKSTRLTHLYFADDVMVFF 538
            S+RG+RQGC LSPY++V+ M V + +L          +HP+C++  LTHL FADD+MVF 
Sbjct: 799  SERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCFADDIMVFS 858

Query: 539  KGTLEAATVLKCGLERFSACSGLEVNVKKTSLFCSGVSIEEKTLLLCCLGCSEGTLPVTY 718
             GT ++        E+F+A S L+++++K+++F +G+S   KT +L       GTLPV Y
Sbjct: 859  DGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKY 918

Query: 719  LGIPLISTRISYTNCLPLLERVIKKVHSWKTKFLAY 826
            LG+PL++ R++ ++ LPL+E++  ++ SW  +FL++
Sbjct: 919  LGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSF 954


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
            72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  238 bits (608), Expect = 9e-61
 Identities = 116/276 (42%), Positives = 183/276 (66%), Gaps = 1/276 (0%)
 Frame = +2

Query: 2    ISCYNVIYKCITKILAVRMKTILRTIISAK*SEFISGRSIQDNVLVAHELVKNYHRP-LS 178
            ISC NV+YK I+KI+A R+K +L   I    S F+  R + +NVL+A E+VK+YH+  +S
Sbjct: 420  ISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVS 479

Query: 179  ARCALKIDLTKAYVTVN*KIICVSLQKFGFPSMFIHWVQLCLSTAKFSIMINGAPYGFFG 358
            +RCALKID++KA+ +V  K +   L+   FP  F HW+ LC++TA FS+ +NG   G F 
Sbjct: 480  SRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNGELAGVFS 539

Query: 359  SKRGIRQGCPLSPYIFVMVMEVFNSILQAQVDHGLFGFHPKCKSTRLTHLYFADDVMVFF 538
            S R +RQGC LSPY+FV+ M+V + +L   V    FG+HPKC++  LTHL FADD+M+  
Sbjct: 540  SARELRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLSFADDLMILS 599

Query: 539  KGTLEAATVLKCGLERFSACSGLEVNVKKTSLFCSGVSIEEKTLLLCCLGCSEGTLPVTY 718
             G + +   +   L  F+  SGL+++++K++++ +GV       ++       G LPV Y
Sbjct: 600  DGKVRSIDGIVKVLYEFAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPVRY 659

Query: 719  LGIPLISTRISYTNCLPLLERVIKKVHSWKTKFLAY 826
            LG+PL+S R++ ++CLPL+E++ KK+ +W ++FL++
Sbjct: 660  LGLPLVSKRLTASDCLPLIEQLRKKIEAWTSRFLSF 695