BLASTX nr result

ID: Papaver22_contig00030719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00030719
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional ...   111   2e-22
ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional ...   111   2e-22
ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP...   111   2e-22
ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP...   105   2e-20
ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP...   105   2e-20

>ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 411

 Score =  111 bits (278), Expect = 2e-22
 Identities = 60/142 (42%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
 Frame = -2

Query: 859 QNESDPNHTTLYVGGFSSNVTEDYFKAYLSPFGELSHVQLLPGRGSGFVKYVDRECAEDA 680
           QNE+DPN+TT++VG    NVT+D+ +   S +GEL HV++  G+  GFV++ DR CAE+A
Sbjct: 262 QNENDPNNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFADRSCAEEA 321

Query: 679 LMMLNGYPVGNSVLKLSWRRSPSNVKKNTDPNQLPAVAGNMDGRNKAVWGSSSSGSNKRK 500
           L +LNG  +G   ++LSW RSPSN +   DPNQ    AG   G     +G ++ G     
Sbjct: 322 LRVLNGTLLGGQNVRLSWGRSPSNKQAQADPNQWNGAAG--AGSGGGYYGYAAQGYENYG 379

Query: 499 YIDSNQWHAQGPNINMY-SYQG 437
           Y  +      G + NMY SY G
Sbjct: 380 YAPA------GQDPNMYGSYPG 395


>ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 409

 Score =  111 bits (278), Expect = 2e-22
 Identities = 61/142 (42%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
 Frame = -2

Query: 859 QNESDPNHTTLYVGGFSSNVTEDYFKAYLSPFGELSHVQLLPGRGSGFVKYVDRECAEDA 680
           QNE+DPN+TT++VG    NVT+D+ +   S +GEL HV++  G+  GFV++ DR CAE+A
Sbjct: 261 QNENDPNNTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFADRSCAEEA 320

Query: 679 LMMLNGYPVGNSVLKLSWRRSPSNVKKNTDPNQLPAVAGNMDGRNKAVWGSSSSGSNKRK 500
           L +LNG  +G   ++LSW RSPSN +   DPNQ    AG+  G     +G ++ G     
Sbjct: 321 LRVLNGTLLGGQNVRLSWGRSPSNKQAQADPNQWNGGAGSGGG----YYGYAAQGYENYG 376

Query: 499 YIDSNQWHAQGPNINMY-SYQG 437
           Y       A G + NMY SY G
Sbjct: 377 YAP-----AAGQDPNMYGSYPG 393


>ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
           sativus] gi|449472157|ref|XP_004153511.1| PREDICTED:
           polyadenylate-binding protein RBP45-like [Cucumis
           sativus]
          Length = 408

 Score =  111 bits (277), Expect = 2e-22
 Identities = 58/141 (41%), Positives = 81/141 (57%)
 Frame = -2

Query: 859 QNESDPNHTTLYVGGFSSNVTEDYFKAYLSPFGELSHVQLLPGRGSGFVKYVDRECAEDA 680
           QNE+DPN+TT++VG   SNVT+++ +   S +GEL HV++  G+  GFV++ DR CAE+A
Sbjct: 257 QNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEA 316

Query: 679 LMMLNGYPVGNSVLKLSWRRSPSNVKKNTDPNQLPAVAGNMDGRNKAVWGSSSSGSNKRK 500
           L +LNG P+G   ++LSW RSPSN +   DPNQ     G   G     +     G     
Sbjct: 317 LRILNGTPIGGQNIRLSWGRSPSNKQPQADPNQWNGGGGGGGG-----YYGYGQGYENYS 371

Query: 499 YIDSNQWHAQGPNINMYSYQG 437
           Y  +    AQ PN+    Y G
Sbjct: 372 YAPA----AQDPNMFYSGYGG 388


>ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
           [Cucumis sativus]
          Length = 156

 Score =  105 bits (261), Expect = 2e-20
 Identities = 45/93 (48%), Positives = 66/93 (70%)
 Frame = -2

Query: 859 QNESDPNHTTLYVGGFSSNVTEDYFKAYLSPFGELSHVQLLPGRGSGFVKYVDRECAEDA 680
           QNE+DPN+TT++VG   +NVT+++ +     +GEL HV++  G+  GFV++ DR CAE+A
Sbjct: 9   QNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFADRNCAEEA 68

Query: 679 LMMLNGYPVGNSVLKLSWRRSPSNVKKNTDPNQ 581
           L +LNG  +G   ++LSW RSPSN +   DPNQ
Sbjct: 69  LRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQ 101


>ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
           sativus]
          Length = 404

 Score =  105 bits (261), Expect = 2e-20
 Identities = 45/93 (48%), Positives = 66/93 (70%)
 Frame = -2

Query: 859 QNESDPNHTTLYVGGFSSNVTEDYFKAYLSPFGELSHVQLLPGRGSGFVKYVDRECAEDA 680
           QNE+DPN+TT++VG   +NVT+++ +     +GEL HV++  G+  GFV++ DR CAE+A
Sbjct: 257 QNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFADRNCAEEA 316

Query: 679 LMMLNGYPVGNSVLKLSWRRSPSNVKKNTDPNQ 581
           L +LNG  +G   ++LSW RSPSN +   DPNQ
Sbjct: 317 LRVLNGTQIGGQNIRLSWGRSPSNKQPQADPNQ 349


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