BLASTX nr result

ID: Papaver22_contig00030708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00030708
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h...    94   1e-17
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...    91   1e-16
emb|CBI20740.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a...    87   1e-15
ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis...    87   1e-15

>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 41/59 (69%), Positives = 48/59 (81%)
 Frame = +3

Query: 288 PLYFMEAMRKTFLSLDMVCLTVFDECHRTTGNHAYAKIMKEFYHRSANKPKIFGIAAAP 464
           P   ++A+RK FLSLDMV L + DECHR TGNH YAKIMKEFYH+S NKPKIFG+ A+P
Sbjct: 151 PQILLDALRKAFLSLDMVSLMIIDECHRATGNHPYAKIMKEFYHKSNNKPKIFGMTASP 209


>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 38/59 (64%), Positives = 47/59 (79%)
 Frame = +3

Query: 288 PLYFMEAMRKTFLSLDMVCLTVFDECHRTTGNHAYAKIMKEFYHRSANKPKIFGIAAAP 464
           P   ++A+RK FLSL+ VCL + DECHR TGNH Y KIMKEFYH+S +KPKIFG+ A+P
Sbjct: 152 PQILLDALRKAFLSLETVCLMIVDECHRATGNHPYTKIMKEFYHKSVDKPKIFGMTASP 210


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 38/59 (64%), Positives = 47/59 (79%)
 Frame = +3

Query: 288 PLYFMEAMRKTFLSLDMVCLTVFDECHRTTGNHAYAKIMKEFYHRSANKPKIFGIAAAP 464
           P   ++A+RK FLSL+ VCL + DECHR TGNH Y KIMKEFYH+S +KPKIFG+ A+P
Sbjct: 160 PQILLDALRKAFLSLETVCLMIVDECHRATGNHPYTKIMKEFYHKSVDKPKIFGMTASP 218


>ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
          Length = 1671

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 36/59 (61%), Positives = 46/59 (77%)
 Frame = +3

Query: 288 PLYFMEAMRKTFLSLDMVCLTVFDECHRTTGNHAYAKIMKEFYHRSANKPKIFGIAAAP 464
           P   ++A+RK FL ++M+CL V DECHRT GNH Y KIMKEFYH++  KPKIFG+ A+P
Sbjct: 172 PQILLDALRKAFLRMEMICLIVIDECHRTIGNHPYTKIMKEFYHQANEKPKIFGMTASP 230


>ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
           gi|223544646|gb|EEF46162.1| Ribonuclease III, putative
           [Ricinus communis]
          Length = 1660

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
 Frame = +3

Query: 249 SVPMRQAESNGYD-----PLYFMEAMRKTFLSLDMVCLTVFDECHRTTGNHAYAKIMKEF 413
           S+ + + E N +D     P   ++A+RK FL+L+MV L + DECHRTTGNH   KIMKEF
Sbjct: 150 SMKVWEKEINEHDVLVMTPQILLDALRKAFLNLEMVSLMIIDECHRTTGNHPCTKIMKEF 209

Query: 414 YHRSANKPKIFGIAAAP 464
           YH+ +NKPKIFG+ A+P
Sbjct: 210 YHKLSNKPKIFGMTASP 226


Top