BLASTX nr result

ID: Papaver22_contig00030450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00030450
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vi...   161   6e-38
emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]   161   6e-38
ref|XP_002297618.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|XP_002523406.1| RNA binding protein, putative [Ricinus commu...   140   1e-31
emb|CBI16556.3| unnamed protein product [Vitis vinifera]              129   2e-28

>ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vinifera]
          Length = 711

 Score =  161 bits (407), Expect = 6e-38
 Identities = 87/154 (56%), Positives = 104/154 (67%), Gaps = 6/154 (3%)
 Frame = -2

Query: 446 SVKDFEAVQVLDKVGKHAYPEKLLTRSHGLNSLRYISPGSISDHELQNHANTGGRVLGDA 267
           S  DF A+ VLDKVGK   PEK+LTRS+GLNSLR I  GSI ++E   H N  GRV+ + 
Sbjct: 287 SSTDFNAIHVLDKVGKMTIPEKILTRSNGLNSLRTIKFGSIRENEAGTHVNQNGRVIPNG 346

Query: 266 IFRHQLSMPNTGSFQLRDC---SGDVDIRHGNSRI---QPQKFNSLDEVAGRIYKLAKDQ 105
            FR +LS P  G  QL      S   D  H  + I   QPQK+NS+DEV GRIY ++KDQ
Sbjct: 347 HFRQRLSSPTAGHLQLDSLCTWSLSTDTAHLKTNILRPQPQKYNSVDEVVGRIYHMSKDQ 406

Query: 104 NGARFLQRRFIEGTTEDINKIFCEIIDHIVELMT 3
           NG RFLQR+F +G+ ED+ KIF EIIDHIVELMT
Sbjct: 407 NGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMT 440


>emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]
          Length = 1051

 Score =  161 bits (407), Expect = 6e-38
 Identities = 87/154 (56%), Positives = 104/154 (67%), Gaps = 6/154 (3%)
 Frame = -2

Query: 446 SVKDFEAVQVLDKVGKHAYPEKLLTRSHGLNSLRYISPGSISDHELQNHANTGGRVLGDA 267
           S  DF A+ VLDKVGK   PEK+LTRS+GLNSLR I  GSI ++E   H N  GRV+ + 
Sbjct: 328 SSTDFNAIHVLDKVGKMTIPEKILTRSNGLNSLRTIKFGSIRENEAGTHVNQNGRVIPNG 387

Query: 266 IFRHQLSMPNTGSFQLRDC---SGDVDIRHGNSRI---QPQKFNSLDEVAGRIYKLAKDQ 105
            FR +LS P  G  QL      S   D  H  + I   QPQK+NS+DEV GRIY ++KDQ
Sbjct: 388 HFRQRLSSPTAGHLQLDSLCTWSLSTDTAHLKTNILRPQPQKYNSVDEVVGRIYHMSKDQ 447

Query: 104 NGARFLQRRFIEGTTEDINKIFCEIIDHIVELMT 3
           NG RFLQR+F +G+ ED+ KIF EIIDHIVELMT
Sbjct: 448 NGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMT 481


>ref|XP_002297618.1| predicted protein [Populus trichocarpa] gi|222844876|gb|EEE82423.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score =  143 bits (360), Expect = 2e-32
 Identities = 74/141 (52%), Positives = 94/141 (66%)
 Frame = -2

Query: 425 VQVLDKVGKHAYPEKLLTRSHGLNSLRYISPGSISDHELQNHANTGGRVLGDAIFRHQLS 246
           ++VLDKVGK ++PEK+LTRS GLN+L+ +  GS+  +E   H N  G++L +A   H LS
Sbjct: 215 IRVLDKVGKQSFPEKILTRSQGLNTLKALKFGSVGGNESLAHLNHNGKLLSNAHLFHSLS 274

Query: 245 MPNTGSFQLRDCSGDVDIRHGNSRIQPQKFNSLDEVAGRIYKLAKDQNGARFLQRRFIEG 66
            P  G+               N R QP K+NS+DEV GRIY +AKDQ+G RFLQR F EG
Sbjct: 275 TPTAGT---------------NLRAQPPKYNSVDEVTGRIYLMAKDQHGCRFLQRTFSEG 319

Query: 65  TTEDINKIFCEIIDHIVELMT 3
           T +D+ KIF EIIDHIVELMT
Sbjct: 320 TPQDVEKIFLEIIDHIVELMT 340


>ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
           gi|223537356|gb|EEF38985.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 771

 Score =  140 bits (353), Expect = 1e-31
 Identities = 73/147 (49%), Positives = 101/147 (68%), Gaps = 6/147 (4%)
 Frame = -2

Query: 425 VQVLDKVGKHAYPEKLLTRSHGLNSLRYISPGSISDHELQNHANTGGRVLGDAIFRHQLS 246
           + +LD+VGK ++PEK+LTRS GL++L+ +   S   +E   + +  G+VL +   RH L+
Sbjct: 322 MNILDEVGKQSFPEKILTRSQGLSTLKAVKYSSAGGNESLANLSQNGKVLLNGHLRHTLT 381

Query: 245 MPNTGSFQLR-----DCSGDV-DIRHGNSRIQPQKFNSLDEVAGRIYKLAKDQNGARFLQ 84
            P+   FQL      D S D+ D++  N R QPQK+NS+DEV GR+Y +AKDQ+G RFLQ
Sbjct: 382 PPSAECFQLDHLSSWDLSPDIIDLKSTNLRPQPQKYNSVDEVTGRVYLMAKDQHGCRFLQ 441

Query: 83  RRFIEGTTEDINKIFCEIIDHIVELMT 3
           R+F EGT +DI KIF E+IDHI ELMT
Sbjct: 442 RKFSEGTPQDIEKIFLEVIDHIAELMT 468


>emb|CBI16556.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  129 bits (325), Expect = 2e-28
 Identities = 74/148 (50%), Positives = 92/148 (62%)
 Frame = -2

Query: 446 SVKDFEAVQVLDKVGKHAYPEKLLTRSHGLNSLRYISPGSISDHELQNHANTGGRVLGDA 267
           S  DF A+ VLDKVGK   PEK+LTRS+GLNSLR I  GSI ++E             D+
Sbjct: 328 SSTDFNAIHVLDKVGKMTIPEKILTRSNGLNSLRTIKFGSIRENE------------ADS 375

Query: 266 IFRHQLSMPNTGSFQLRDCSGDVDIRHGNSRIQPQKFNSLDEVAGRIYKLAKDQNGARFL 87
           +    LS            +    ++    R QPQK+NS+DEV GRIY ++KDQNG RFL
Sbjct: 376 LCTWSLS------------TDTAHLKTNILRPQPQKYNSVDEVVGRIYHMSKDQNGCRFL 423

Query: 86  QRRFIEGTTEDINKIFCEIIDHIVELMT 3
           QR+F +G+ ED+ KIF EIIDHIVELMT
Sbjct: 424 QRKFTDGSPEDVQKIFLEIIDHIVELMT 451


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