BLASTX nr result

ID: Papaver22_contig00030371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00030371
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-...   221   7e-56
emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]   220   2e-55
emb|CBI15109.3| unnamed protein product [Vitis vinifera]              214   7e-54
ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...   210   1e-52
dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea...   209   2e-52

>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
           1 [Vitis vinifera]
          Length = 625

 Score =  221 bits (563), Expect = 7e-56
 Identities = 123/213 (57%), Positives = 149/213 (69%), Gaps = 16/213 (7%)
 Frame = +1

Query: 7   MEKSVTPNAISTILANPNSSSYSEIPQLIVQVVDLKPIGSRFTFKASDGKMKLKATLPSY 186
           M KS+TPN ISTIL+NP+  S +E+P++IVQV+DL PIG+R+ F A+DGKMKLKA  PS 
Sbjct: 1   MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIGNRYKFTANDGKMKLKAMFPSS 60

Query: 187 MLSDXXXXXXXXXXXXXVQDYNITEISN--EKCLIVLKCEVVAPVLENEIGSDPKSQE-- 354
             S+             V DY + +I +  EK LIV KCE V+P LE E  ++ KS+E  
Sbjct: 61  FSSEINSGNIQNLGLIQVIDYTLNDIPSKQEKYLIVTKCEAVSPALEVEFKTEVKSEETG 120

Query: 355 IAFKPKQE-----------TGIALKPKQDVVAKSAAQIVHEQQNN-APSERMAMTRRVHP 498
           I  +PKQ            TGI LKPKQ++VAKSAAQIV+EQ  N AP+ RMAMTRRVHP
Sbjct: 121 ILLRPKQVVEIQREVKTEGTGIFLKPKQEIVAKSAAQIVNEQHGNMAPAARMAMTRRVHP 180

Query: 499 LVSLNPYQGIWTIKVRLTSKGNMRTYTNARGDG 597
           LVSLNPYQG WTIKVRLT+KG MRTY NARG+G
Sbjct: 181 LVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEG 213


>emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]
          Length = 634

 Score =  220 bits (560), Expect = 2e-55
 Identities = 123/213 (57%), Positives = 148/213 (69%), Gaps = 16/213 (7%)
 Frame = +1

Query: 7   MEKSVTPNAISTILANPNSSSYSEIPQLIVQVVDLKPIGSRFTFKASDGKMKLKATLPSY 186
           M KS+TPN ISTIL+NP+  S +E+P++IVQV+DL PIG+R+ F A+DGKMKLKA  PS 
Sbjct: 1   MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIGNRYKFTANDGKMKLKAMFPSS 60

Query: 187 MLSDXXXXXXXXXXXXXVQDYNITEISN--EKCLIVLKCEVVAPVLENEIGSDPKSQE-- 354
             S+             V DY + +I +  EK LIV KCE V+P LE E  ++ KS+E  
Sbjct: 61  FSSEINSGNIQNLGLIQVIDYTLNDIPSKQEKYLIVTKCEAVSPALEVEFKTEVKSEETG 120

Query: 355 IAFKPKQE-----------TGIALKPKQDVVAKSAAQIVHEQQNN-APSERMAMTRRVHP 498
           I   PKQ            TGI LKPKQ++VAKSAAQIV+EQ  N AP+ RMAMTRRVHP
Sbjct: 121 ILLXPKQVVEIQXEVKXEGTGIFLKPKQEIVAKSAAQIVNEQHGNMAPAARMAMTRRVHP 180

Query: 499 LVSLNPYQGIWTIKVRLTSKGNMRTYTNARGDG 597
           LVSLNPYQG WTIKVRLT+KG MRTY NARG+G
Sbjct: 181 LVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEG 213


>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score =  214 bits (546), Expect = 7e-54
 Identities = 117/200 (58%), Positives = 141/200 (70%), Gaps = 3/200 (1%)
 Frame = +1

Query: 7   MEKSVTPNAISTILANPNSSSYSEIPQLIVQVVDLKPIGSRFTFKASDGKMKLKATLPSY 186
           M KS+TPN ISTIL+NP+  S +E+P++IVQV+DL PIG+R+ F A+DGKMKLKA  PS 
Sbjct: 1   MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIGNRYKFTANDGKMKLKAMFPSS 60

Query: 187 MLSDXXXXXXXXXXXXXVQDYNITEISN--EKCLIVLKCEVVAPVLENEIGSDPKSQEIA 360
             S+             V DY + +I +  EK LIV KCE V+P LE E  ++ K     
Sbjct: 61  FSSEINSGNIQNLGLIQVIDYTLNDIPSKQEKYLIVTKCEAVSPALEVEFKTEVK----- 115

Query: 361 FKPKQETGIALKPKQDVVAKSAAQIVHEQQNN-APSERMAMTRRVHPLVSLNPYQGIWTI 537
                 TGI LKPKQ++VAKSAAQIV+EQ  N AP+ RMAMTRRVHPLVSLNPYQG WTI
Sbjct: 116 -----RTGIFLKPKQEIVAKSAAQIVNEQHGNMAPAARMAMTRRVHPLVSLNPYQGNWTI 170

Query: 538 KVRLTSKGNMRTYTNARGDG 597
           KVRLT+KG MRTY NARG+G
Sbjct: 171 KVRLTNKGTMRTYKNARGEG 190


>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546255|gb|EEF47757.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 622

 Score =  210 bits (535), Expect = 1e-52
 Identities = 115/211 (54%), Positives = 145/211 (68%), Gaps = 14/211 (6%)
 Frame = +1

Query: 7   MEKSVTPNAISTILANPNSSSYSEIPQLIVQVVDLKPIGSRFTFKASDGKMKLKATLPSY 186
           M K V+P+AI+ +L+NP   S S+IP++IVQ+ +L+P G  + F A+DGK K+KA   S 
Sbjct: 1   MGKRVSPDAIAALLSNPKPDSISDIPEIIVQITNLEPKGKSYGFDANDGKRKIKAIFNSR 60

Query: 187 MLSDXXXXXXXXXXXXXVQDYNITEI--SNEKCLIVLKCEVVAPVLENEIGSDPKSQE-- 354
           + ++             + DY + EI   +E  LI+ KCEVV+P LE EI  + K++E  
Sbjct: 61  LSTEIISGNIQNLGLIRILDYTVNEIPSKSENYLIITKCEVVSPALEMEIKDEAKTEEAA 120

Query: 355 IAFKPKQET---------GIALKPKQDVVAKSAAQIVHEQQNN-APSERMAMTRRVHPLV 504
           I  KPKQET         GI LKPKQ++VAKSAAQIVHEQ  N AP+ RMAMTRRVHPLV
Sbjct: 121 ITLKPKQETQVIKQEVSGGILLKPKQEMVAKSAAQIVHEQHKNMAPTARMAMTRRVHPLV 180

Query: 505 SLNPYQGIWTIKVRLTSKGNMRTYTNARGDG 597
           SLNPYQG WTIKVR+TSKGNMRTY NARG+G
Sbjct: 181 SLNPYQGNWTIKVRVTSKGNMRTYKNARGEG 211


>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
          Length = 604

 Score =  209 bits (533), Expect = 2e-52
 Identities = 115/200 (57%), Positives = 140/200 (70%), Gaps = 3/200 (1%)
 Frame = +1

Query: 7   MEKSVTPNAISTILANPNSSSYSEIPQLIVQVVDLKPIGSRFTFKASDGKMKLKATLPSY 186
           ME+SVTP+AIS ILANP+  S S++P+LIVQVVDLK  G+R+ F A+DGKMKLKA L S 
Sbjct: 1   MERSVTPDAISAILANPSPDSGSDLPELIVQVVDLKQAGNRYMFTANDGKMKLKAILQSS 60

Query: 187 MLSDXXXXXXXXXXXXXVQDYNITEI--SNEKCLIVLKCEVVAPVLENEIGSDPKSQEIA 360
           + S+             + DY + +I   NEK LIV KC+ V+  LE E  +  K++E  
Sbjct: 61  LSSEVISGSIQNLGLVRILDYTLNDIPMKNEKYLIVTKCDAVSSPLEAEYKTGVKTEE-- 118

Query: 361 FKPKQETGIALKPKQDVVAKSAAQIVHEQQNN-APSERMAMTRRVHPLVSLNPYQGIWTI 537
                  GI L+PKQ+ VAKSAAQIVHEQ  N  P  R+AMTRR+HPLVSLNPYQGIWTI
Sbjct: 119 ------NGIVLRPKQEFVAKSAAQIVHEQNGNIVPPARLAMTRRIHPLVSLNPYQGIWTI 172

Query: 538 KVRLTSKGNMRTYTNARGDG 597
           KVR+TSKGNMR Y NARG+G
Sbjct: 173 KVRVTSKGNMRFYKNARGEG 192


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