BLASTX nr result

ID: Papaver22_contig00030239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00030239
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    62   5e-08
gb|AFK37781.1| unknown [Lotus japonicus]                               61   8e-08
ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arab...    60   2e-07
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    60   2e-07
emb|CAN60955.1| hypothetical protein VITISV_008877 [Vitis vinifera]    60   2e-07

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
 Frame = +1

Query: 1   NGLICIYGSQPDLPDTYGPAIVFNPVTKEYIVLPEFERFPEFETDSSIHLACGFGYVAET 180
           NGL+C+  S  +         ++NP T  Y  LP+  ++P+ E      +  GFG+  +T
Sbjct: 128 NGLLCLSDSLFN-----DSLYIYNPFTGRYKELPKSLQYPDQE------VVFGFGFNPKT 176

Query: 181 NEYKVVRIYMV---VGKPNXXXXXXYTVGSGK-------GWKHVGKFGFKFFTHAEHTHG 330
           NEYKV+RI       G+        Y +   +       GW+ +GK  ++    A  T  
Sbjct: 177 NEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLGKVSYRLVRRASET-- 234

Query: 331 VFLNGALYW-----RNTEDGKVVVFDLAEEKFREHISP 429
             +NG L+W     RN    ++V FDL +E+FRE   P
Sbjct: 235 -LVNGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKP 271


>gb|AFK37781.1| unknown [Lotus japonicus]
          Length = 489

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
 Frame = +1

Query: 1   NGLICIYGSQPDLPDTYGPAIVFNPVTKEYIVLPEFERFPEFETDSSIHLACGFGYVAET 180
           NGLIC+   + D        +V NP+T E+I LP+  R  +    S   +  GFG+  + 
Sbjct: 182 NGLICLCDRERDY------FVVCNPITGEFIRLPQTSRIGKTNKFSIQEIYAGFGFQPKN 235

Query: 181 NEYKVVRIYM-VVGKPNXXXXXXYTVGSGKGWKHVGKFGFKFFTHAEHTHGVFLNGALYW 357
           NEYKVVRI   +           +T+G+   W++V +    +F H        ++GAL+W
Sbjct: 236 NEYKVVRILRGLQFYHGIMAAEVHTLGTST-WRNV-EVNSMYFYHLRFP--TCVSGALHW 291

Query: 358 RNTEDG--KVVVFDLAEEKFREHISPP 432
             +  G   ++ FD   E+FR   +PP
Sbjct: 292 IGSYHGTLSILCFDFESERFRSFPTPP 318


>ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arabidopsis lyrata subsp.
           lyrata] gi|297328298|gb|EFH58717.1| hypothetical protein
           ARALYDRAFT_896735 [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 10/149 (6%)
 Frame = +1

Query: 1   NGLICIYGSQPDLPDTYG--PAIVFNPVTKEYIVLPEFERFPEFETDSSIHL----ACGF 162
           NGL+C+      L  +Y   P  +FNP T +       +R PE   D+ +      + GF
Sbjct: 141 NGLVCL-----SLGASYKKVPVFLFNPTTGDS------KRLPEAPVDTPVESFNFRSYGF 189

Query: 163 GYVAETNEYKVVRIYMV-VGKPNXXXXXXYTVGSGKGWKHVGKFGFKFFTHAEHTHGVFL 339
           G+   T++YKVV++    V   +      Y++     W+ +    +K  ++A HT GV  
Sbjct: 190 GFDDHTHDYKVVKLVATSVSNQHILDASVYSL-KANSWRRICILNYKG-SNAFHTCGVHF 247

Query: 340 NGALYW---RNTEDGKVVVFDLAEEKFRE 417
           NGA++W   R+ +   ++VFDL  E+FRE
Sbjct: 248 NGAIHWVLTRHEDHRVILVFDLTTEEFRE 276


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 12/155 (7%)
 Frame = +1

Query: 1   NGLICIYGSQPDLPDTYGPAIVFNPVTKEYIVLP----EFERFPEFETDSSIHLACGFGY 168
           NGL+CI     D+        V+NP T+++ V+P    E +R+  F T S      GFGY
Sbjct: 103 NGLLCISNVVDDIA-------VWNPSTRKHRVVPFLPIELKRY--FGTKSCSVYVFGFGY 153

Query: 169 VAETNEYKVVRIYMVVGKPNXXXXXXYTVGS--GKGWKHVGKFGFKFFTHAEHTHGVFLN 342
            +  ++YK+VRI    G           V S   + W+ +G     +  H    +GVF N
Sbjct: 154 DSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDM--PYCVHYPGANGVFAN 211

Query: 343 GALYWRNTEDGK------VVVFDLAEEKFREHISP 429
           GAL+W   E+ +      VV  DL  E +RE + P
Sbjct: 212 GALHWVVGENPESNVANIVVALDLGVEDYREVLQP 246


>emb|CAN60955.1| hypothetical protein VITISV_008877 [Vitis vinifera]
          Length = 289

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 50/157 (31%), Positives = 67/157 (42%), Gaps = 13/157 (8%)
 Frame = +1

Query: 1   NGLICIYGSQ-PDLPDTYGPAIVFNPVTKEYIVLPEFERFPEFETDSSIHLACGFGYVAE 177
           NGLICIY    P  P      IV NP T E + LP    F + +  S  H     G+   
Sbjct: 109 NGLICIYEQLVPSSPKLSFRVIVCNPSTGERVTLPP-THFSKADF-SFCHQNISLGFDPS 166

Query: 178 TNEYKVVRIYMVVGKPNXXXXXXYTVGSGKGWKHVGKFGFKFFTHAEHTHGVFLNGALYW 357
           T  YK++R +   G+        +T+GS     H  +       +A  T G+ LNG +YW
Sbjct: 167 TKTYKILRAWW--GRYGGPIHEIFTLGS-----HAWRIIKDDPEYALETKGICLNGTIYW 219

Query: 358 RNTED------------GKVVVFDLAEEKFREHISPP 432
             T D             +V+ FD+ EEKFR    PP
Sbjct: 220 AATFDLSKDNSSFVVMKNRVIAFDVGEEKFRSVPVPP 256


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