BLASTX nr result

ID: Papaver22_contig00030127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00030127
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308607.1| predicted protein [Populus trichocarpa] gi|2...    88   1e-15
ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    84   1e-14
ref|XP_002516536.1| ring finger protein, putative [Ricinus commu...    82   9e-14
ref|XP_003534218.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    80   3e-13
ref|XP_003545611.1| PREDICTED: putative RING-H2 finger protein A...    80   3e-13

>ref|XP_002308607.1| predicted protein [Populus trichocarpa] gi|222854583|gb|EEE92130.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 62/167 (37%), Positives = 82/167 (49%), Gaps = 17/167 (10%)
 Frame = +3

Query: 3   KNLDKFKHKIIVSDIVYKNRWXXXXXXXXXXXXXEMLNFMSSKRFSPSGCSTSNS-GGIS 179
           K   KF HKII+SD++ K+RW             EML  MSS RF+P   S++    G+S
Sbjct: 236 KLFHKFMHKIIISDVLIKSRWSDANSSDFLSLNTEMLGVMSSNRFTPLKSSSARFYNGLS 295

Query: 180 N-----DVSSGHEETSI------TTKTTASSRSTFLNSATAT----KRSMSEITSISRLS 314
                  V    E   +      T   + S  S+ LNS+       KRS SEIT  SR  
Sbjct: 296 RVENLEKVKDDTERKRLSKPQFPTVDRSNSVPSSSLNSSKMLNPVGKRSTSEITIFSRFR 355

Query: 315 HFGF-SKIKRVESNNPSGKEERISRLWFPIVRKTVEWIAGREKRIKQ 452
                +K+K   S    GK+ERI  LW PI R+TV+W AGRE+ ++Q
Sbjct: 356 QLSAKNKMKESASLGNGGKDERIRMLWLPIARRTVQWFAGRERNLRQ 402


>ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]
          Length = 423

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 61/174 (35%), Positives = 80/174 (45%), Gaps = 29/174 (16%)
 Frame = +3

Query: 3   KNLDKFKHKIIVSDIVYKNRWXXXXXXXXXXXXXEMLNFMSSKRFSPSGCSTSNSG---- 170
           K L K  HKIIVSD+V KNRW             E+++ MSS RF+    + S  G    
Sbjct: 238 KILHKINHKIIVSDVVLKNRWSSVSSSDLMYLNSELVHAMSSDRFASLDSNNSAMGRPIE 297

Query: 171 ------------------------GISNDVSSGHEETSITTKTTASSRSTFLNSATATKR 278
                                     SN VSS    ++  T+  +   S FL+     KR
Sbjct: 298 DWEVMKIKEEIERKRIFESRVSRINHSNPVSSSGLPSTSKTEANSGHASRFLH--PTEKR 355

Query: 279 SMSEITSISRLSHFGF-SKIKRVESNNPSGKEERISRLWFPIVRKTVEWIAGRE 437
           SMSEIT+ SR + F   ++I+       + KEER+ RLW PI R+TVEW A RE
Sbjct: 356 SMSEITACSRYADFSTKNRIRESSLAQNNIKEERMRRLWLPIARRTVEWFANRE 409


>ref|XP_002516536.1| ring finger protein, putative [Ricinus communis]
           gi|223544356|gb|EEF45877.1| ring finger protein,
           putative [Ricinus communis]
          Length = 407

 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 61/167 (36%), Positives = 77/167 (46%), Gaps = 25/167 (14%)
 Frame = +3

Query: 3   KNLDKFKHKIIVSDIVYKNRWXXXXXXXXXXXXXEMLNFMSSKRFSPSGCSTSNSGG--- 173
           K L KFKHKIIVSD++ KNRW             EMLN MSS  FS S  +   S     
Sbjct: 227 KFLHKFKHKIIVSDVIIKNRWSDFNSSDLLSMSSEMLNVMSSNMFSHSDSTNGRSYNNLS 286

Query: 174 -------ISNDVSSGHEETSITTKTTAS---SRSTFLNSA-----------TATKRSMSE 290
                  I  D+       S  TK   S   S S F +++              KRS+SE
Sbjct: 287 MNEHIEKIKEDIERKRLCESKLTKAEGSDSFSASCFPSTSYKGESSLKMINPGEKRSISE 346

Query: 291 ITSISRLSHFGF-SKIKRVESNNPSGKEERISRLWFPIVRKTVEWIA 428
           IT  SR +     +KI+   S   S +E+R  RLWFPI ++TV+W A
Sbjct: 347 ITVCSRFNGSSLKNKIRESASPRSSEREDRTRRLWFPIAQRTVQWFA 393


>ref|XP_003534218.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Glycine max]
          Length = 419

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 56/174 (32%), Positives = 79/174 (45%), Gaps = 27/174 (15%)
 Frame = +3

Query: 3   KNLDKFKHKIIVSDIVYKNRWXXXXXXXXXXXXXEMLNFMSSKRFSPS------GCSTSN 164
           K   K  H+I +SD+V+K+RW             EMLN  SS RFS +      G    N
Sbjct: 236 KGYHKHNHRITISDVVFKHRWSNVSSSDLMFLNSEMLNDTSSNRFSSNLESITRGVVVEN 295

Query: 165 SG-------------------GISNDVSSGHEETSITTKTTASSRSTFLNSATATKRSMS 287
                                G  N++ S H+E       T+ S   ++N     KRSMS
Sbjct: 296 EQIMNIKEEMERKISFENKVVGALNNIVSDHKEDP---PFTSDSAPKYVNPGE--KRSMS 350

Query: 288 EITSISRLSHFGFSK--IKRVESNNPSGKEERISRLWFPIVRKTVEWIAGREKR 443
           EIT++SR    G     +K  +S   + KEER+ ++WFPI R+T +W   RE+R
Sbjct: 351 EITAVSRFGDLGMKMRVLKDSDSLQNNLKEERMRQIWFPIARRTAQWFVNREER 404


>ref|XP_003545611.1| PREDICTED: putative RING-H2 finger protein ATL12-like [Glycine max]
          Length = 395

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 55/154 (35%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
 Frame = +3

Query: 3   KNLDKFKHKIIVSDIVYKNRWXXXXXXXXXXXXXEMLNFMSSKRFSPSGCSTSNSGGISN 182
           K++ KF HKI+VSD+V ++RW             EML  MSS+RFSP           SN
Sbjct: 248 KHMHKFNHKIVVSDVVTRSRWSDLNSSDMLSLNSEMLLDMSSRRFSP-----------SN 296

Query: 183 DVSSGHEETSITTKTTASSRSTFLNSATATKRSMSEITSISRLSHFGFSKIKRVE----S 350
           ++  G            SS  T LN  TA KRSMSEI  + R       K  R E    S
Sbjct: 297 EMIRGDSSLPFIFNDDESS-FTLLN--TAEKRSMSEIARVPRF--IETCKQNRTEAGVAS 351

Query: 351 NNPSGKEERISRLWFPIVRKTVEWIAGREKRIKQ 452
           +  + +EER+ R+W  I ++TV+W  G+E+  ++
Sbjct: 352 SGSNEREERLRRIWLGIAQRTVQWFVGQERNSRE 385


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