BLASTX nr result

ID: Papaver22_contig00030124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00030124
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    53   2e-14
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              50   2e-14
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    58   7e-14
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    49   2e-13
ref|XP_003541139.1| PREDICTED: uncharacterized protein LOC100788...    53   1e-12

>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 52.8 bits (125), Expect(3) = 2e-14
 Identities = 26/62 (41%), Positives = 38/62 (61%)
 Frame = -2

Query: 352 YLGSPLFTNKSKVKSFEPMVKNMKNRLIGWQNKNISIPGKTMLIKSVTSTMSIYQMNCFR 173
           YLG P     SK K F  +   +++R+ GW  K +S  GK ++IKSV +T+  Y M+CFR
Sbjct: 534 YLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFR 593

Query: 172 IP 167
           +P
Sbjct: 594 LP 595



 Score = 44.3 bits (103), Expect(3) = 2e-14
 Identities = 17/41 (41%), Positives = 27/41 (65%)
 Frame = -1

Query: 125 FWWGKDIENPKGLYLKAWDPMCTSTDQGGLGIPNLQHFNTA 3
           FWW  + ++ +G++  AWD +C+S   GGLG  N+  FN+A
Sbjct: 609 FWWSSNGDS-RGMHWMAWDKLCSSKSDGGLGFRNVDDFNSA 648



 Score = 26.2 bits (56), Expect(3) = 2e-14
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 468 GQLINFSKSGVFFSTKTDPDRKKEIQ 391
           GQ INFSKS + F  K +   K +I+
Sbjct: 495 GQQINFSKSSIQFGHKVEDSIKADIK 520


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 50.1 bits (118), Expect(3) = 2e-14
 Identities = 24/62 (38%), Positives = 36/62 (58%)
 Frame = -2

Query: 352 YLGSPLFTNKSKVKSFEPMVKNMKNRLIGWQNKNISIPGKTMLIKSVTSTMSIYQMNCFR 173
           YLG P     SK + F  +   ++ R+ GW  K +S  GK ++IKSV + +  Y M+CFR
Sbjct: 600 YLGLPESLGGSKTRIFSFVRDRLQTRINGWSAKFLSKGGKEVMIKSVVAVLPTYVMSCFR 659

Query: 172 IP 167
           +P
Sbjct: 660 LP 661



 Score = 42.7 bits (99), Expect(3) = 2e-14
 Identities = 17/41 (41%), Positives = 27/41 (65%)
 Frame = -1

Query: 125 FWWGKDIENPKGLYLKAWDPMCTSTDQGGLGIPNLQHFNTA 3
           FWW  D E+ +G++  AW+ +C+S   GGLG  ++  FN+A
Sbjct: 675 FWWSSDGES-RGMHWMAWNKLCSSKADGGLGFRSVNDFNSA 714



 Score = 30.0 bits (66), Expect(3) = 2e-14
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -3

Query: 468 GQLINFSKSGVFFSTKTDPDRKKEIQ 391
           GQ+INFSKS + F  K   D K EI+
Sbjct: 561 GQMINFSKSSIQFGHKVGDDIKAEIK 586


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 58.2 bits (139), Expect(2) = 7e-14
 Identities = 29/80 (36%), Positives = 45/80 (56%)
 Frame = -2

Query: 406  KEGNPRHLHVKPIPLDDRYLGSPLFTNKSKVKSFEPMVKNMKNRLIGWQNKNISIPGKTM 227
            KE     L +  +P  +RYLG P  + K K K F+ +   + NR+ GW+ K +S  GK +
Sbjct: 1020 KEACSAILDMPVVPCHERYLGLPTVSGKDKKKLFQSLPDRVWNRVHGWEGKLLSKAGKEV 1079

Query: 226  LIKSVTSTMSIYQMNCFRIP 167
            LIK+V   +  Y M+ F++P
Sbjct: 1080 LIKTVAQAIPNYTMSVFQLP 1099



 Score = 43.5 bits (101), Expect(2) = 7e-14
 Identities = 19/41 (46%), Positives = 24/41 (58%)
 Frame = -1

Query: 125  FWWGKDIENPKGLYLKAWDPMCTSTDQGGLGIPNLQHFNTA 3
            FWWGK  E  KG++ + W  +C S   GGLG  +L  FN A
Sbjct: 1113 FWWGK--EGGKGIHWRRWSDLCFSKKDGGLGFRDLSLFNQA 1151


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 49.3 bits (116), Expect(3) = 2e-13
 Identities = 22/62 (35%), Positives = 37/62 (59%)
 Frame = -2

Query: 352  YLGSPLFTNKSKVKSFEPMVKNMKNRLIGWQNKNISIPGKTMLIKSVTSTMSIYQMNCFR 173
            YLG P F ++SK K+   +  ++  ++ GW+   +S  GK +LIK+V + +  Y M CF+
Sbjct: 1359 YLGLPTFWHRSKKKALGFIKDSILRKVKGWKQATLSQAGKEVLIKAVATAIPAYPMGCFK 1418

Query: 172  IP 167
             P
Sbjct: 1419 FP 1420



 Score = 40.8 bits (94), Expect(3) = 2e-13
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -1

Query: 128  DFWWGKDIENPKGLYLKAWDPMCTSTDQGGLGIPNLQHFNTA 3
            DFWWG    + +G++ K+WD +      GG+G  NL+ FN +
Sbjct: 1433 DFWWGN--VDTRGIHWKSWDFLARPKKDGGMGFRNLEDFNNS 1472



 Score = 29.3 bits (64), Expect(3) = 2e-13
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 468  GQLINFSKSGVFFSTKTDPD 409
            GQLIN  KS +FFS  T P+
Sbjct: 1320 GQLINVEKSSIFFSPNTPPE 1339


>ref|XP_003541139.1| PREDICTED: uncharacterized protein LOC100788661 [Glycine max]
          Length = 372

 Score = 53.1 bits (126), Expect(2) = 1e-12
 Identities = 28/80 (35%), Positives = 44/80 (55%)
 Frame = -2

Query: 406 KEGNPRHLHVKPIPLDDRYLGSPLFTNKSKVKSFEPMVKNMKNRLIGWQNKNISIPGKTM 227
           ++G+P    +   P    YLG P+    S    +EP++K  + +L  W  KNIS+ GK  
Sbjct: 183 RQGDPLAPFLLETPFS--YLGIPIGVKSSSSIVWEPLIKKCEAKLSKWAQKNISMGGKIT 240

Query: 226 LIKSVTSTMSIYQMNCFRIP 167
           LI SV + + IY ++ F+IP
Sbjct: 241 LINSVVNALPIYLLSFFKIP 260



 Score = 44.3 bits (103), Expect(2) = 1e-12
 Identities = 20/46 (43%), Positives = 30/46 (65%)
 Frame = -1

Query: 143 IRFQRDFWWGKDIENPKGLYLKAWDPMCTSTDQGGLGIPNLQHFNT 6
           ++ QR+F WG D +N K  ++K WD +C    +GGLGI ++  FNT
Sbjct: 268 VKLQRNFLWGGDQDNKKIPWVK-WDIVCLPNCEGGLGIKDIAKFNT 312


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