BLASTX nr result

ID: Papaver22_contig00030011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00030011
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318095.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
emb|CAN83924.1| hypothetical protein VITISV_026535 [Vitis vinifera]    56   3e-06
emb|CAN67397.1| hypothetical protein VITISV_022672 [Vitis vinifera]    56   3e-06

>ref|XP_002318095.1| predicted protein [Populus trichocarpa] gi|222858768|gb|EEE96315.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
 Frame = +2

Query: 98  MAAFLHKLLKKNS----QIKTITTNLKTPFQSNLSAPIF-QSNLIDFKPNTDSVSDLKNP 262
           MA  +HKL+ K +     ++ IT+ LKTP    LS P +  +      P+T       NP
Sbjct: 1   MANIIHKLISKTTPTTPSLRIITSTLKTP---QLSDPNYLTATTTSLLPSTTKSDFSNNP 57

Query: 263 I-LFSPNNENALSKSLLFYPSFPFGYFLNPNTVTQIKIDDAVEEVSEDEKTVWADSV 430
           I L +P     +     +YPSFPFG+ LNP + T      A+EE  +D +T+WADSV
Sbjct: 58  IPLLNPIPTQDVKPLQFYYPSFPFGFCLNPISATGFGQVKAMEEDVDDSRTLWADSV 114


>emb|CAN83924.1| hypothetical protein VITISV_026535 [Vitis vinifera]
          Length = 137

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 47/115 (40%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
 Frame = +2

Query: 98  MAAFLHKLLKKNSQIKTITTNLKTPFQSNLSAPIFQSNLIDFKPNTDSVSDLKNPILFSP 277
           MAA + KLL+K S  + I   L     SNL AP         +  +D+  +L NP   S 
Sbjct: 1   MAAAVQKLLRKPSY-QRILPCLNNGKSSNLVAPPLLHKPYPPETKSDAEPNL-NPCQGSS 58

Query: 278 NNENALS-KSLLFYPSFPFGYFLN--PNTVTQIKIDDAVEEV-SEDEKTVWADSV 430
             EN     S   YPSFPFGY LN  P+ V +      VEEV S+D +T+WADSV
Sbjct: 59  TTENHTHYSSFQIYPSFPFGYCLNPIPSPVLEQSQPLKVEEVDSDDSRTIWADSV 113


>emb|CAN67397.1| hypothetical protein VITISV_022672 [Vitis vinifera]
          Length = 137

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 48/121 (39%), Positives = 57/121 (47%), Gaps = 10/121 (8%)
 Frame = +2

Query: 98  MAAFLHKLLKKNSQIKTITTNLKTPFQSNLSAP------IFQSNLIDFKPNTDSVSDLKN 259
           MAA + KLL+K S  + I   L     SNL AP             D +PN        N
Sbjct: 1   MAAAVRKLLRKPSY-QRILPCLNNGKSSNLVAPPLLHKPYLPETKFDAEPNL-------N 52

Query: 260 PILFSPNNENALS-KSLLFYPSFPFGYFLN--PNTVTQIKIDDAVEEV-SEDEKTVWADS 427
           P   S   EN     S   YPSFPFGY LN  P+ V +      VEEV S+D +T+WADS
Sbjct: 53  PCQGSSTTENHTHYSSFQIYPSFPFGYCLNPIPSPVLEQSQPSKVEEVDSDDSRTIWADS 112

Query: 428 V 430
           V
Sbjct: 113 V 113


Top