BLASTX nr result

ID: Papaver22_contig00029920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00029920
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313634.1| predicted protein [Populus trichocarpa] gi|2...    74   4e-11
ref|XP_002515850.1| conserved hypothetical protein [Ricinus comm...    66   7e-09
ref|XP_003567159.1| PREDICTED: double-stranded RNA-binding prote...    66   9e-09
sp|Q5N8Z0.1|DRB1_ORYSJ RecName: Full=Double-stranded RNA-binding...    63   6e-08
tpg|DAA57428.1| TPA: hypothetical protein ZEAMMB73_801819 [Zea m...    57   4e-06

>ref|XP_002313634.1| predicted protein [Populus trichocarpa] gi|222850042|gb|EEE87589.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 33/48 (68%), Positives = 38/48 (79%)
 Frame = +2

Query: 410 TEMRSSLLCNRVRVYPRKPDMVFPEGVTVMPISDDQWVAVSLDIPSQQ 553
           T  RS LLCNRVRVYP  PD+  P G+TVMPISD+QWVAVSL+ P +Q
Sbjct: 435 TRQRSYLLCNRVRVYPCYPDIALPNGITVMPISDNQWVAVSLEFPMEQ 482


>ref|XP_002515850.1| conserved hypothetical protein [Ricinus communis]
           gi|223545005|gb|EEF46519.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 284

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 12/107 (11%)
 Frame = +2

Query: 269 ASSSVSPDDN--EQSSPSSVDDIEPPLPTMV---SQFADLSTG-------ASNMIAMFPT 412
           AS  + P+D+    SS S +  I    PT+    S  +D++T        +SN     P 
Sbjct: 176 ASLKIGPEDSMLSHSSVSYMQRICETAPTLFKEGSMSSDIATMESDSHLLSSNTNMGKPE 235

Query: 413 EMRSSLLCNRVRVYPRKPDMVFPEGVTVMPISDDQWVAVSLDIPSQQ 553
              S LLC RVR+YP  P++ FP+G+TV+PI+D+ WVAV+L+ P++Q
Sbjct: 236 APESYLLCERVRMYPSYPNIDFPKGITVLPITDNIWVAVNLEFPNEQ 282


>ref|XP_003567159.1| PREDICTED: double-stranded RNA-binding protein 1-like [Brachypodium
           distachyon]
          Length = 608

 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
 Frame = +2

Query: 272 SSSVSPDDNEQSSPSSVDDI--EPPLPTMVSQFADLSTGASNMIAMFPTEMRS--SLLCN 439
           S+    D      PSS  ++    P PT ++   + ST A++  AM  T +    S+L N
Sbjct: 515 SAKEDKDKTTVQEPSSEAEVMGSTPGPTSLN---NTSTLAASTTAMPVTSVGCGCSMLTN 571

Query: 440 RVRVYPRKPDMVFPEGVTVMPISDDQWVAVSL 535
           R++VYPR+PDMV PEG TV+P SD+ WVAVSL
Sbjct: 572 RIQVYPRRPDMVLPEGATVLPFSDEAWVAVSL 603


>sp|Q5N8Z0.1|DRB1_ORYSJ RecName: Full=Double-stranded RNA-binding protein 1; AltName:
           Full=dsRNA-binding protein 1 gi|56785214|dbj|BAD82066.1|
           putative dsRNA-binding protein ODB1 [Oryza sativa
           Japonica Group]
          Length = 441

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +2

Query: 425 SLLCNRVRVYPRKPDMVFPEGVTVMPISDDQWVAVSL 535
           SLL NRV+VYPR+PD+V PEG TV+P SDD WVAVSL
Sbjct: 400 SLLTNRVQVYPRRPDLVLPEGATVLPFSDDVWVAVSL 436


>tpg|DAA57428.1| TPA: hypothetical protein ZEAMMB73_801819 [Zea mays]
          Length = 472

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = +2

Query: 437 NRVRVYPRKPDMVFPEGVTVMPISDDQWVAVSLDIPSQQ 553
           NR++VYPR  DMV PEG  V+PISD+QWVAVSL    +Q
Sbjct: 420 NRIQVYPRHTDMVIPEGAAVLPISDNQWVAVSLPYSMEQ 458


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