BLASTX nr result

ID: Papaver22_contig00029905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00029905
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627685.1| Pentatricopeptide repeat-containing protein ...    65   6e-09
ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containi...    59   4e-07
emb|CBI28186.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06
ref|XP_002524479.1| pentatricopeptide repeat-containing protein,...    56   3e-06

>ref|XP_003627685.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|358344437|ref|XP_003636296.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|358345563|ref|XP_003636846.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355502231|gb|AES83434.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355502781|gb|AES83984.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355521707|gb|AET02161.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 791

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
 Frame = +3

Query: 291 SFKNFLSLKHGFHSSVH-----IPHPNPSSLNRSMLSYLHNNLPSLALETLRKQIQFGGT 455
           SFK  L L H      H     IP PN SS+NRSML++LH NLP  AL   + Q QF   
Sbjct: 22  SFKTCLKLFHSLKKHEHNLFEKIPQPNASSINRSMLNFLHKNLPFQALSVFKNQTQFPFL 81

Query: 456 SALNENTIAIAFKSC 500
             ++E T+A++FK+C
Sbjct: 82  QNIDEVTLALSFKAC 96


>ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Glycine max]
          Length = 895

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/68 (41%), Positives = 40/68 (58%)
 Frame = +3

Query: 297 KNFLSLKHGFHSSVHIPHPNPSSLNRSMLSYLHNNLPSLALETLRKQIQFGGTSALNENT 476
           K F +LKH  H    IPHPN +S+N SML+ LH+ LP  AL   +   Q      ++E T
Sbjct: 22  KFFHALKHDHHQFDFIPHPNAASVNHSMLNCLHSRLPFQALTAFKNHFQLHSLENVDEVT 81

Query: 477 IAIAFKSC 500
           +A++ K+C
Sbjct: 82  VALSLKAC 89


>emb|CBI28186.3| unnamed protein product [Vitis vinifera]
          Length = 760

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/91 (36%), Positives = 46/91 (50%)
 Frame = +3

Query: 231 MFSLHCRFRSCFLEQDQVLASFKNFLSLKHGFHSSVHIPHPNPSSLNRSMLSYLHNNLPS 410
           M + H  F+       Q    FK F S KH        P    +SLNRSML+ L  NL  
Sbjct: 1   MITRHPPFKILHRVVQQRSIQFKYFHSSKHVHQPLDQSPQTTIASLNRSMLTALRRNLSL 60

Query: 411 LALETLRKQIQFGGTSALNENTIAIAFKSCC 503
            AL+  +KQ+Q+G    +++ T+AI  K+CC
Sbjct: 61  EALDLFKKQLQWGFVGNIDQVTVAIVLKACC 91


>ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial [Vitis vinifera]
          Length = 773

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/91 (36%), Positives = 46/91 (50%)
 Frame = +3

Query: 231 MFSLHCRFRSCFLEQDQVLASFKNFLSLKHGFHSSVHIPHPNPSSLNRSMLSYLHNNLPS 410
           M + H  F+       Q    FK F S KH        P    +SLNRSML+ L  NL  
Sbjct: 1   MITRHPPFKILHRVVQQRSIQFKYFHSSKHVHQPLDQSPQTTIASLNRSMLTALRRNLSL 60

Query: 411 LALETLRKQIQFGGTSALNENTIAIAFKSCC 503
            AL+  +KQ+Q+G    +++ T+AI  K+CC
Sbjct: 61  EALDLFKKQLQWGFVGNIDQVTVAIVLKACC 91


>ref|XP_002524479.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536267|gb|EEF37919.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 576

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/51 (50%), Positives = 36/51 (70%)
 Frame = +3

Query: 351 PNPSSLNRSMLSYLHNNLPSLALETLRKQIQFGGTSALNENTIAIAFKSCC 503
           PN  S++RSML  +H NLP  AL+  +K IQF   ++++E TIA+A KSCC
Sbjct: 41  PNSVSIHRSMLDSIHKNLPFQALKIFKKNIQFDFFNSIDEVTIALALKSCC 91


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