BLASTX nr result

ID: Papaver22_contig00029888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00029888
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]    57   3e-06
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi...    57   4e-06

>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/98 (41%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
 Frame = +3

Query: 357 SQAGPSTLPTQAGGEWNFT-PSDPVWLPYFGATSHLTNNPAVLVDPQEFLGADLVMVGDG 533
           SQ+ P   P QA      T P +  WL   GA+ H+T N   L     F G D +M+GDG
Sbjct: 132 SQSRPPA-PWQAQANVTTTIPPNTTWLLDSGASHHVTTNLHNLALHSPFDGTDEIMIGDG 190

Query: 534 MTLPISLIGSSYLTPAASNFTFDLKNVLLVLHIKHNLL 647
             LPIS  GS+ LT  + +FT  L NVL V  +K NL+
Sbjct: 191 FGLPISHTGSTSLTTPSHSFT--LSNVLCVPTMKRNLI 226


>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1149

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 33/76 (43%), Positives = 45/76 (59%)
 Frame = +3

Query: 420 DPVWLPYFGATSHLTNNPAVLVDPQEFLGADLVMVGDGMTLPISLIGSSYLTPAASNFTF 599
           D  W+P   AT+H+TNN + L   Q +LG D VM  DG  LPI+ IGS+ L   + N   
Sbjct: 311 DSGWVPDSAATAHITNNSSRLQQMQPYLGNDTVMASDGNFLPITHIGSANLPSTSGN--L 368

Query: 600 DLKNVLLVLHIKHNLL 647
            LK+VL+  +I  +LL
Sbjct: 369 PLKDVLVCPNIAKSLL 384


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