BLASTX nr result

ID: Papaver22_contig00029835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00029835
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34
ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [...   149   5e-34
ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 ...   145   6e-33
ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 ...   145   6e-33
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   145   7e-33

>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
           predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  150 bits (378), Expect = 2e-34
 Identities = 94/205 (45%), Positives = 118/205 (57%), Gaps = 15/205 (7%)
 Frame = +3

Query: 3   LNLLQAHGFPEVMGVFTHLDEFKDEKELKVETIECLKDHFWTEIYRGATISCLSGLYNDS 182
           LN+LQ HGFP++MGV THLD+FKD K+LK +T + LK  FWTEIY GA +  LSGL +  
Sbjct: 169 LNILQVHGFPKIMGVLTHLDQFKDVKKLK-KTKQRLKHRFWTEIYDGAKLFYLSGLIHGK 227

Query: 183 LCRMGEVQELAQHIISM-LQPRS--SSHPYVLVDCIEDVYLPEELHKDANCKRNINLRGY 353
             +  E+  LA+ I  M   P S  +SHPYVL D  EDV  PE +  D  C RNI L GY
Sbjct: 228 YVKR-EIHNLARFISVMKFHPLSWRTSHPYVLADRFEDVTPPERVRVDNKCDRNITLYGY 286

Query: 354 LRGGNISKSGAKVHLAGVGDFRLDSVRSTADPFPLSSDTEMGKDFVDIENQSF------- 512
           LRG N+ K G KVH+AGVGD+ L  V + ADP PL S  +  K   D E   +       
Sbjct: 287 LRGCNL-KRGTKVHIAGVGDYNLAGVTALADPCPLPSAAKK-KGLRDKEKLFYAPMSGLG 344

Query: 513 -----RTGTYVRLEVHDVPFQVVDN 572
                +   Y+ +  H V +  VDN
Sbjct: 345 DLVYDKDAVYININDHFVQYSNVDN 369



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/41 (65%), Positives = 36/41 (87%)
 Frame = +3

Query: 495 IENQSFRTGTYVRLEVHDVPFQVVDNFDPCHPILVVGGISL 617
           +E + F+TGTY+RLE+HDVPF++V++FDPC PIL VGGI L
Sbjct: 772 LEIEGFQTGTYLRLELHDVPFEMVEHFDPCDPIL-VGGIGL 811


>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
           gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
           bms1, putative [Ricinus communis]
          Length = 825

 Score =  149 bits (375), Expect = 5e-34
 Identities = 94/205 (45%), Positives = 120/205 (58%), Gaps = 15/205 (7%)
 Frame = +3

Query: 3   LNLLQAHGFPEVMGVFTHLDEFKDEKELKVETIECLKDHFWTEIYRGATISCLSGLYNDS 182
           LN+LQ HGFP+VMGV THLD+FKD K+L+ +T + LK  FWTEIY GA +  LSGL +  
Sbjct: 172 LNILQVHGFPKVMGVLTHLDKFKDVKKLR-KTKQRLKHRFWTEIYDGAKLFYLSGLIHGK 230

Query: 183 LCRMGEVQELAQHIISM-LQPRS--SSHPYVLVDCIEDVYLPEELHKDANCKRNINLRGY 353
             R  E+  LA+ I  M   P S  +SHPYVLVD  EDV  PE++H +    RN+ L GY
Sbjct: 231 YPRR-EIHNLARFISVMKFHPLSWRTSHPYVLVDRFEDVTPPEQVHMNRKSDRNVTLYGY 289

Query: 354 LRGGNISKSGAKVHLAGVGDFRLDSVRSTADPFPLSSDTEMGKDFVDIENQSF------- 512
           LRG N+ K G KVH+AGVGD+ L  V + ADP PL S  +  K   D E   +       
Sbjct: 290 LRGCNL-KKGTKVHIAGVGDYSLAGVTALADPCPLPSAAKK-KGLRDKEKLFYAPMSGVG 347

Query: 513 -----RTGTYVRLEVHDVPFQVVDN 572
                +   Y+ +  H V F  VD+
Sbjct: 348 DLLYDKDAVYININDHFVQFSKVDD 372



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 29/39 (74%), Positives = 36/39 (92%)
 Frame = +3

Query: 495 IENQSFRTGTYVRLEVHDVPFQVVDNFDPCHPILVVGGI 611
           +E + F+TGTYVRLEVHDVPF++V++FDPCHPIL VGGI
Sbjct: 731 LEIEGFQTGTYVRLEVHDVPFEMVEHFDPCHPIL-VGGI 768


>ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 homolog, partial
           [Cucumis sativus]
          Length = 532

 Score =  145 bits (366), Expect = 6e-33
 Identities = 94/205 (45%), Positives = 119/205 (58%), Gaps = 15/205 (7%)
 Frame = +3

Query: 3   LNLLQAHGFPEVMGVFTHLDEFKDEKELKVETIECLKDHFWTEIYRGATISCLSGLYNDS 182
           LN+L  HG P+VMGV THLD+FKD K+L+ +T + LK  FWTEI  GA +  LSGL +  
Sbjct: 173 LNILHNHGLPKVMGVLTHLDKFKDAKKLR-KTKQRLKHRFWTEIRTGAKLFYLSGLVHGK 231

Query: 183 LCRMGEVQELAQHIISM-LQPRS--SSHPYVLVDCIEDVYLPEELHKDANCKRNINLRGY 353
             +  EV  LA+ I  M  QP S  ++HPYVLVD  EDV  PE +H +  C RNI L GY
Sbjct: 232 YPKR-EVHNLARFISVMKFQPLSWRTNHPYVLVDRFEDVTPPERVHTNNKCDRNITLYGY 290

Query: 354 LRGGNISKSGAKVHLAGVGDFRLDSVRSTADPFPLSSDTEMGKDFVDIENQSF------- 512
           LRG N+ K G KVH+AGVGDF L SV + ADP PL S  +  K   D E   +       
Sbjct: 291 LRGCNL-KYGTKVHIAGVGDFELASVTNLADPCPLPSAAKK-KGLRDKEKLFYAPMSGLG 348

Query: 513 -----RTGTYVRLEVHDVPFQVVDN 572
                +   Y+ +  H V +  VD+
Sbjct: 349 DLLYDKDAVYININDHFVQYSKVDD 373


>ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis
           sativus]
          Length = 1198

 Score =  145 bits (366), Expect = 6e-33
 Identities = 94/205 (45%), Positives = 119/205 (58%), Gaps = 15/205 (7%)
 Frame = +3

Query: 3   LNLLQAHGFPEVMGVFTHLDEFKDEKELKVETIECLKDHFWTEIYRGATISCLSGLYNDS 182
           LN+L  HG P+VMGV THLD+FKD K+L+ +T + LK  FWTEI  GA +  LSGL +  
Sbjct: 173 LNILHNHGLPKVMGVLTHLDKFKDAKKLR-KTKQRLKHRFWTEIRTGAKLFYLSGLVHGK 231

Query: 183 LCRMGEVQELAQHIISM-LQPRS--SSHPYVLVDCIEDVYLPEELHKDANCKRNINLRGY 353
             +  EV  LA+ I  M  QP S  ++HPYVLVD  EDV  PE +H +  C RNI L GY
Sbjct: 232 YPKR-EVHNLARFISVMKFQPLSWRTNHPYVLVDRFEDVTPPERVHTNNKCDRNITLYGY 290

Query: 354 LRGGNISKSGAKVHLAGVGDFRLDSVRSTADPFPLSSDTEMGKDFVDIENQSF------- 512
           LRG N+ K G KVH+AGVGDF L SV + ADP PL S  +  K   D E   +       
Sbjct: 291 LRGCNL-KYGTKVHIAGVGDFELASVTNLADPCPLPSAAKK-KGLRDKEKLFYAPMSGLG 348

Query: 513 -----RTGTYVRLEVHDVPFQVVDN 572
                +   Y+ +  H V +  VD+
Sbjct: 349 DLLYDKDAVYININDHFVQYSKVDD 373


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score =  145 bits (365), Expect = 7e-33
 Identities = 85/157 (54%), Positives = 102/157 (64%), Gaps = 3/157 (1%)
 Frame = +3

Query: 3   LNLLQAHGFPEVMGVFTHLDEFKDEKELKVETIECLKDHFWTEIYRGATISCLSGLYNDS 182
           LN+LQ HGFP+VMGV THLD+FKD K+LK +T + LK  FWTEIY GA +  LSGL +  
Sbjct: 172 LNILQVHGFPKVMGVLTHLDKFKDAKKLK-KTKQRLKHRFWTEIYDGAKLFYLSGLVHGK 230

Query: 183 LCRMGEVQELAQHIISM-LQPRS--SSHPYVLVDCIEDVYLPEELHKDANCKRNINLRGY 353
             +  E+  LA+ I  M   P S  +SHPY+LVD  EDV  PE +  +  C RNI L GY
Sbjct: 231 YPKR-EIHNLARFISVMKFHPLSWRASHPYILVDRFEDVTPPERVQLNNKCDRNITLYGY 289

Query: 354 LRGGNISKSGAKVHLAGVGDFRLDSVRSTADPFPLSS 464
           LRG N+ K G KVH+AGVGD  L  V   ADP PL S
Sbjct: 290 LRGCNL-KKGTKVHIAGVGDHSLAGVTGLADPCPLPS 325



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = +3

Query: 495 IENQSFRTGTYVRLEVHDVPFQVVDNFDPCHPILVVGGISL 617
           IE + FRTGTY+RLEVHDVPF++V++FDP HP+L VGGI L
Sbjct: 731 IEVEGFRTGTYLRLEVHDVPFEMVEHFDPFHPVL-VGGIGL 770


Top