BLASTX nr result

ID: Papaver22_contig00029601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00029601
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    81   2e-13
ref|XP_003594794.1| F-box protein [Medicago truncatula] gi|35548...    74   3e-11
ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...    73   6e-11
dbj|BAJ24867.1| S-locus linked F-box protein type-4 [Petunia x h...    72   1e-10
ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-10

>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 3/168 (1%)
 Frame = -1

Query: 523 VTMVAACHGIICLHDIFPRDISLWNPATKQFRILP-KSLPLEEAFG--EFQDDYVGFGFD 353
           V ++ +C+G++C+ +I   DI+LWNP+ +  R++P   + L+  FG    +    GFG+D
Sbjct: 89  VKILGSCNGLLCICNIVD-DIALWNPSIRAHRVVPYLPVELKRYFGMCSCRVSVFGFGYD 147

Query: 352 TETKDYKVLLITSFKLSDYWEGDPKTGNRVQVYSMRTNSWRWCADVDLPAYCIARDVLNQ 173
               DYK++ I  F   D    +    + V+V+S+R NSWR  AD+    YC+     N 
Sbjct: 148 LSNDDYKLVRIAQFGGVDRKSFE----SEVKVFSLRKNSWRRIADM---PYCVLYPGEN- 199

Query: 172 GIYRNSNYLFLASQSYAISIEGEPDIKMKTVVISFDFSKETYRIIPAP 29
           GIY N    +L SQ        +PD  +   +++ D   E Y ++P P
Sbjct: 200 GIYANGALHWLVSQ--------DPDSTVADTIVALDLGVEDYHVVPKP 239


>ref|XP_003594794.1| F-box protein [Medicago truncatula] gi|355483842|gb|AES65045.1|
           F-box protein [Medicago truncatula]
          Length = 374

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
 Frame = -1

Query: 517 MVAACHGIICLHDIF-PRDISLWNPATKQFRILPKSLPLEEAFGEFQDDYV-GFGFDTET 344
           + +A +GI+C+++ F P  I LWNP T +  ++P +LP E     F D ++ GFG+D ++
Sbjct: 119 LCSAINGILCIYNWFDPSQIVLWNPTTNEVHVVPSNLP-ESLPNVFVDQFLYGFGYDHDS 177

Query: 343 KDYKVLLITSFKLSDYWEGDPKTGNRVQVYSMRTNSWRWCADVDLPAYCIARDVLNQGIY 164
            DYKV+ +  F+   +   DP      ++YS+R++SWR   DVD+P   +    L+  +Y
Sbjct: 178 DDYKVIRVVRFREDMFKTHDP----FYEIYSLRSHSWR-KLDVDIP--IVFYGPLSSEVY 230

Query: 163 RNSNYLFLASQSYAISIEGEPDIKMKTVVISFDFSKETYRIIP 35
            +    +L              I  KT V+SF+ S E +   P
Sbjct: 231 LDGVCHWLRR------------INDKTDVVSFNLSNEVFFTTP 261


>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 49/169 (28%), Positives = 91/169 (53%), Gaps = 4/169 (2%)
 Frame = -1

Query: 523 VTMVAACHGIICLHDIFPRDISLWNPATKQFRILPKSLPLEEAFGE----FQDDYVGFGF 356
           +T++ +C+G++C+ ++   DI+ WNP+ +Q RILP  LP+          F     GFGF
Sbjct: 91  ITLLGSCNGLLCISNVAD-DIAFWNPSLRQHRILPY-LPVPRRRHPDTTLFAARVCGFGF 148

Query: 355 DTETKDYKVLLITSFKLSDYWEGDPKTGNRVQVYSMRTNSWRWCADVDLPAYCIARDVLN 176
           D +T+DYK++ I+ F        D    ++V++Y++R N+W+    +   A C AR    
Sbjct: 149 DHKTRDYKLVRISYFVDLH----DRSFDSQVKLYTLRANAWKTLPSLPY-ALCCAR---T 200

Query: 175 QGIYRNSNYLFLASQSYAISIEGEPDIKMKTVVISFDFSKETYRIIPAP 29
            G++  +      S  + ++ + EPD     ++I+FD + + +R +P P
Sbjct: 201 MGVFVGN------SLHWVVTRKLEPD--QPDLIIAFDLTHDIFRELPLP 241


>dbj|BAJ24867.1| S-locus linked F-box protein type-4 [Petunia x hybrida]
          Length = 403

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
 Frame = -1

Query: 517 MVAACHGIICLHDIFPRDISLWNPATKQFRILPKSLPLEEAFGEFQD-DYVGFGFDTETK 341
           ++  CHG+I + D   R   L+NP+T+++R+LP S P     G ++  D  GFGFD+   
Sbjct: 122 IIGPCHGLIAVMD--SRSTILFNPSTRKYRLLPSS-PFGTPKGYYRSIDSGGFGFDSVVN 178

Query: 340 DYKVLLITSFKLSDYWEGDPKTGNR-VQVYSMRTNSWRWC--ADVDLPAYCIARDVLNQG 170
           DYKVL I+     D + G P+ G R V+VY +  + WR     D DLP        L   
Sbjct: 179 DYKVLRISDVYTEDRY-GYPEEGERKVEVYEVGIDIWRELDHVDKDLPRLF----WLTSS 233

Query: 169 IYRNSNYLFLASQSYAISIEGEPDIKMKTVVISFDFSKETYRIIPAP 29
           +Y N  Y ++ + ++          + K +++ FD S E +R I  P
Sbjct: 234 MYYNGAYHWITTLNH----------EDKLIILCFDMSTEIFRNINTP 270


>ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|222858811|gb|EEE96358.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
 Frame = -1

Query: 505 CHGIICLHDIFPRDISLWNPATKQFRILPKSLPLEEAFGEFQDDYVGFGFDTETKDYKVL 326
           C+GI  +         LWNPATK+F++LP+ +  + +   + +D  GFGFD  T DYKV+
Sbjct: 100 CNGIFYVDSEDSSGSGLWNPATKEFKLLPEKIRNKSSLPLYYEDSYGFGFDPVTNDYKVV 159

Query: 325 LI-TSFKLSDYWEGDPKTGNRVQVYSMRTNSWRWCADVDLPAYCIARDVLNQGIYRNSNY 149
           +I  S+    Y E  P   + V VY++RT+SWR    +D         +L    Y N + 
Sbjct: 160 VIRESYTREYYLEKFP--SSLVIVYTLRTDSWRCWGSLDQ-----GYTLLGNYCYTNVDG 212

Query: 148 LFLASQSYAISIEGEPDIKMKTVVISFDFSKETYRIIPAP 29
           ++     + + +          V++SF+ + + ++ I  P
Sbjct: 213 VYYWQAGHGVHM---------NVILSFNMATDAFQEIQEP 243


Top