BLASTX nr result

ID: Papaver22_contig00029533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00029533
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ08213.1| hypothetical protein OsI_30472 [Oryza sativa Indi...    76   7e-12
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    70   1e-10
gb|ABN07997.1| contains similarity to reverse trancriptase , rel...    71   2e-10
ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [S...    70   4e-10
gb|EEE69227.1| hypothetical protein OsJ_28461 [Oryza sativa Japo...    69   9e-10

>gb|EAZ08213.1| hypothetical protein OsI_30472 [Oryza sativa Indica Group]
          Length = 398

 Score = 76.3 bits (186), Expect = 7e-12
 Identities = 52/151 (34%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
 Frame = +3

Query: 126 GKWNSVFIDQVFQPTVAENVKNISLEDGRDVNDKLVWLTNPKGDISVK*FTIC*SMVQKI 305
           G+W+   ID  F    AE +K I L DG  V+D   W  +PKG  SVK         + +
Sbjct: 165 GEWDEALIDDNFWNVDAEEIKKIPLHDG--VDDWAAWRYDPKGVFSVKSAYKVAVRKRDM 222

Query: 306 ESTLLQITASGK----------KVWKLKTAPKIQMFVWKVIHDILPVFKNLSIRIKDIDT 455
            S     ++SG           K+W+ K A K+QMFVW   H+ L V  NL+ +  +ID 
Sbjct: 223 GSGRDASSSSGSVYGTHTFDWLKIWRCKVAHKVQMFVWWFTHNSLAVRCNLARKGVEIDK 282

Query: 456 ICLMCKAEIETIKHTLFEWCFSRAVWFGLGI 548
           IC +CK   E   H  F+   +RA W  L +
Sbjct: 283 ICPVCKRFDEDNGHLFFKCKNARACWLALNL 313


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 70.1 bits (170), Expect(2) = 1e-10
 Identities = 46/130 (35%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
 Frame = +3

Query: 222  DKLVWLTNPKGDISVK*FTIC*SMVQKIESTLLQ-------ITASGKKVWKLKTAPKIQM 380
            D   WL +  G  SVK  T    + +++   L Q       + +   K+W L TAPKI++
Sbjct: 999  DSFCWLHSHNGLYSVK--TGYEFLSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRI 1056

Query: 381  FVWKVIHDILPVFKNLSIRIKDIDTICLMCKAEIETIKHTLFEWCFSRAVWFGLGISNMA 560
            F+WK +H  +PV   L  R    D  CLMC  E ETI H LFE   +R VW    +S+  
Sbjct: 1057 FLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHILFECPLARQVWAITHLSSAG 1116

Query: 561  PR*LVGVYQN 590
                  VY N
Sbjct: 1117 SEFSNSVYTN 1126



 Score = 22.3 bits (46), Expect(2) = 1e-10
 Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 15/54 (27%)
 Frame = +2

Query: 650  ICWHIWKGD---------------VQIALKEYH*TRQQQSWKQNDIYKLRKTQW 766
            I W +WK                 V  A + YH     Q+  QND   L+ T+W
Sbjct: 1150 ILWFLWKNRNALLFEGKGSITTTLVDKAYEAYHEWFSAQTHMQNDEKHLKITKW 1203


>gb|ABN07997.1| contains similarity to reverse trancriptase , related [Medicago
           truncatula]
          Length = 407

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
 Frame = +3

Query: 132 WNSVFIDQVFQPTVAENVKNISLEDGRDVNDKLVWLTNPKGDISVK*F--TIC*SMVQKI 305
           WN V ++  F     + + +I L +  +  D L+W+ NP G  SVK    T+     Q+I
Sbjct: 252 WNKVILEDQFISINIDQISHIPLVNTTNP-DSLMWMHNPTGIYSVKSGYNTLRTWQTQQI 310

Query: 306 E--STLLQITASGKKVWKLKTAPKIQMFVWKVIHDILPVFKNLSIRIKDIDTICLMCKAE 479
              ST    T   KK+W L T P+ ++ +W++++D LPV  +L  R      +C  C ++
Sbjct: 311 NNTSTSSDETLIWKKIWSLHTIPRHKVLLWRILNDSLPVRSSLRKRGIQCYPLCPRCHSK 370

Query: 480 IETIKHTLFEWCFSRAVWFG 539
            ETI H       S+ VWFG
Sbjct: 371 TETITHLFMSCPLSKRVWFG 390


>ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [Sorghum bicolor]
           gi|241941323|gb|EES14468.1| hypothetical protein
           SORBIDRAFT_07g002160 [Sorghum bicolor]
          Length = 469

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
 Frame = +3

Query: 120 LSGKWNSVFIDQVFQPTVAENVKNISLEDGRDVNDKLVWLTNPKGDISVK*FTIC*SMVQ 299
           +SG+W+   +  +F     +N+ +I L++  ++ D L W  +PKGD SVK      + ++
Sbjct: 132 ISGEWDRNLVTDIFWEADVKNILSIPLKN--EMEDTLAWHYDPKGDFSVKSAYHVLTDMK 189

Query: 300 KIE----------STLLQITASGKKVWKLKTAPKIQMFVWKVIHDILPVFKNLSIRIKDI 449
           ++           S +     +  K+WKL   PK+++F W+  H+ LP+  N+  R  DI
Sbjct: 190 ELSKRRQIGEASASLISPCNNNWHKIWKLHCPPKVKLFFWRFTHNSLPLRMNILRRGMDI 249

Query: 450 DTICLMCKAEIETIKHTLFEWCFSRAVWFGLGISNM 557
           DT C +C    E   H      F +  W  L +  +
Sbjct: 250 DTRCPVCWRLNEDGGHCFLRCKFVKKCWRALNLEEL 285


>gb|EEE69227.1| hypothetical protein OsJ_28461 [Oryza sativa Japonica Group]
          Length = 314

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 50/148 (33%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
 Frame = +3

Query: 135 NSVFIDQVFQPTVAENVKNISLEDGRDVNDKLVWLTNPKGDISVK*FTIC*SMVQKIEST 314
           +   ID  F    AE +K I L DG  V+D   W  +PKG  SVK         + + S 
Sbjct: 84  DEALIDDNFWNVDAEEIKKIPLHDG--VDDWAAWRYDPKGVFSVKSAYKVAVRKRDMGSG 141

Query: 315 LLQITASGK----------KVWKLKTAPKIQMFVWKVIHDILPVFKNLSIRIKDIDTICL 464
               ++SG           K+W+ K A K+QMFVW   H+ L V  NL+ +  +ID IC 
Sbjct: 142 RDASSSSGSVYGTHTFDWLKIWRCKVAHKVQMFVWWFTHNSLAVRCNLARKGVEIDKICP 201

Query: 465 MCKAEIETIKHTLFEWCFSRAVWFGLGI 548
           +CK   E   H  F+   +RA W  L +
Sbjct: 202 VCKRFDEDNGHLFFKCKNARACWLALNL 229


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