BLASTX nr result

ID: Papaver22_contig00029369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00029369
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567703.4| Rhamnogalacturonate lyase family protein [Arabi...    97   1e-25
gb|AAU90065.1| At4g24430 [Arabidopsis thaliana] gi|59958318|gb|A...    97   1e-25
gb|AAL15345.1| AT4g24430/T22A6_260 [Arabidopsis thaliana]              97   1e-25
ref|XP_003603709.1| Rhamnogalacturonate lyase [Medicago truncatu...    97   1e-25
ref|XP_004136250.1| PREDICTED: probable rhamnogalacturonate lyas...    93   1e-25

>ref|NP_567703.4| Rhamnogalacturonate lyase family protein [Arabidopsis thaliana]
           gi|5051785|emb|CAB45078.1| LG27/30-like gene
           [Arabidopsis thaliana] gi|7269293|emb|CAB79353.1|
           LG27/30-like gene [Arabidopsis thaliana]
           gi|332659503|gb|AEE84903.1| Rhamnogalacturonate lyase
           family protein [Arabidopsis thaliana]
          Length = 646

 Score = 97.4 bits (241), Expect(2) = 1e-25
 Identities = 40/67 (59%), Positives = 53/67 (79%)
 Frame = -1

Query: 406 LWEIGVADRSAAEFRVPEPNKNLMNRLYVDRGDWFRQYGTWEQYSAMYPTTDLVFTIGVN 227
           +WEIG+ DRSAAEF VP+PN   +N+LY+   D FRQYG WE+Y+ +YP  DLVFTIGV+
Sbjct: 446 VWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRFRQYGLWERYTELYPKEDLVFTIGVS 505

Query: 226 QHQRDWF 206
            +++DWF
Sbjct: 506 DYKKDWF 512



 Score = 44.3 bits (103), Expect(2) = 1e-25
 Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
 Frame = -3

Query: 128 AHVPRKLGNK-YLPTTWSIVFKVDQVVPSGTYKLRITIASA 9
           AHV RK+G+  Y  TTW I FK++ V  S TYK+RI +A+A
Sbjct: 514 AHVTRKMGDDTYQKTTWQIKFKLENVQKSCTYKIRIALATA 554


>gb|AAU90065.1| At4g24430 [Arabidopsis thaliana] gi|59958318|gb|AAX12869.1|
           At4g24430 [Arabidopsis thaliana]
          Length = 487

 Score = 97.4 bits (241), Expect(2) = 1e-25
 Identities = 40/67 (59%), Positives = 53/67 (79%)
 Frame = -1

Query: 406 LWEIGVADRSAAEFRVPEPNKNLMNRLYVDRGDWFRQYGTWEQYSAMYPTTDLVFTIGVN 227
           +WEIG+ DRSAAEF VP+PN   +N+LY+   D FRQYG WE+Y+ +YP  DLVFTIGV+
Sbjct: 287 VWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRFRQYGLWERYTELYPKEDLVFTIGVS 346

Query: 226 QHQRDWF 206
            +++DWF
Sbjct: 347 DYKKDWF 353



 Score = 44.3 bits (103), Expect(2) = 1e-25
 Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
 Frame = -3

Query: 128 AHVPRKLGNK-YLPTTWSIVFKVDQVVPSGTYKLRITIASA 9
           AHV RK+G+  Y  TTW I FK++ V  S TYK+RI +A+A
Sbjct: 355 AHVTRKMGDDTYQKTTWQIKFKLENVQKSCTYKIRIALATA 395


>gb|AAL15345.1| AT4g24430/T22A6_260 [Arabidopsis thaliana]
          Length = 487

 Score = 97.4 bits (241), Expect(2) = 1e-25
 Identities = 40/67 (59%), Positives = 53/67 (79%)
 Frame = -1

Query: 406 LWEIGVADRSAAEFRVPEPNKNLMNRLYVDRGDWFRQYGTWEQYSAMYPTTDLVFTIGVN 227
           +WEIG+ DRSAAEF VP+PN   +N+LY+   D FRQYG WE+Y+ +YP  DLVFTIGV+
Sbjct: 287 VWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRFRQYGLWERYTELYPKEDLVFTIGVS 346

Query: 226 QHQRDWF 206
            +++DWF
Sbjct: 347 DYKKDWF 353



 Score = 44.3 bits (103), Expect(2) = 1e-25
 Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
 Frame = -3

Query: 128 AHVPRKLGNK-YLPTTWSIVFKVDQVVPSGTYKLRITIASA 9
           AHV RK+G+  Y  TTW I FK++ V  S TYK+RI +A+A
Sbjct: 355 AHVTRKMGDDTYQKTTWQIKFKLENVQKSCTYKIRIALATA 395


>ref|XP_003603709.1| Rhamnogalacturonate lyase [Medicago truncatula]
           gi|355492757|gb|AES73960.1| Rhamnogalacturonate lyase
           [Medicago truncatula]
          Length = 651

 Score = 97.1 bits (240), Expect(2) = 1e-25
 Identities = 40/67 (59%), Positives = 52/67 (77%)
 Frame = -1

Query: 406 LWEIGVADRSAAEFRVPEPNKNLMNRLYVDRGDWFRQYGTWEQYSAMYPTTDLVFTIGVN 227
           LWEIG+ DRSAAEF VP+PN   +N+LYV+  D FRQYG WE+Y+ +YP  DL++TIGV+
Sbjct: 447 LWEIGIPDRSAAEFYVPDPNPKYINKLYVNHPDKFRQYGIWERYAELYPDNDLIYTIGVS 506

Query: 226 QHQRDWF 206
              +DWF
Sbjct: 507 DFTKDWF 513



 Score = 44.3 bits (103), Expect(2) = 1e-25
 Identities = 20/38 (52%), Positives = 25/38 (65%)
 Frame = -3

Query: 116 RKLGNKYLPTTWSIVFKVDQVVPSGTYKLRITIASATY 3
           +K  N Y  TTW I F +D V   G+YKLR+ +ASATY
Sbjct: 520 KKEDNTYQGTTWQIKFNLDNVNRKGSYKLRVALASATY 557


>ref|XP_004136250.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Cucumis
           sativus]
          Length = 633

 Score = 92.8 bits (229), Expect(2) = 1e-25
 Identities = 37/67 (55%), Positives = 52/67 (77%)
 Frame = -1

Query: 406 LWEIGVADRSAAEFRVPEPNKNLMNRLYVDRGDWFRQYGTWEQYSAMYPTTDLVFTIGVN 227
           LWEIG+ DRSA+EF VP+PN   +N+L+VD  D FRQYG W +Y+ +YP  DLV+T+G +
Sbjct: 441 LWEIGIPDRSASEFYVPDPNPIHINKLFVDHPDRFRQYGLWNRYAELYPNEDLVYTVGTS 500

Query: 226 QHQRDWF 206
            +++DWF
Sbjct: 501 DYRKDWF 507



 Score = 48.5 bits (114), Expect(2) = 1e-25
 Identities = 23/41 (56%), Positives = 27/41 (65%)
 Frame = -3

Query: 128 AHVPRKLGNKYLPTTWSIVFKVDQVVPSGTYKLRITIASAT 6
           AHVPRK  N +  TTW I FK+D+V     Y LR+ IASAT
Sbjct: 509 AHVPRKTNNSHEGTTWQIKFKLDRVDHKSMYTLRVAIASAT 549


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