BLASTX nr result

ID: Papaver22_contig00029301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00029301
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX96626.1| retrotransposon protein, putative, Ty3-gypsy sub-...    87   2e-15
ref|XP_002450725.1| hypothetical protein SORBIDRAFT_05g016005 [S...    86   5e-15
gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor]                 86   5e-15
gb|AAV32158.1| putative polyprotein [Oryza sativa Japonica Group]      86   7e-15
gb|AAM74314.2|AC114474_6 Putative retroelement [Oryza sativa Jap...    86   9e-15

>gb|AAX96626.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group] gi|77550171|gb|ABA92968.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 1045

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 45/81 (55%), Positives = 56/81 (69%), Gaps = 3/81 (3%)
 Frame = -1

Query: 654 FRLFLNQFVVVFIIGVLGYSKSKEEHEEHLRIVLQK-REHKLYTTKGNCEFLTPEVLFLG 478
           F  +LN+FVVVFI  +L YSK+KEEHEEHLR+ L+K REH+LY     CEF  PEV FLG
Sbjct: 570 FMEYLNKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKLSKCEFWLPEVKFLG 629

Query: 477 HVISSAAAALE--KIAVVIQW 421
           HVIS    A++   +  V+ W
Sbjct: 630 HVISVGGVAMDPSNVESVLNW 650


>ref|XP_002450725.1| hypothetical protein SORBIDRAFT_05g016005 [Sorghum bicolor]
           gi|241936568|gb|EES09713.1| hypothetical protein
           SORBIDRAFT_05g016005 [Sorghum bicolor]
          Length = 281

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 44/81 (54%), Positives = 58/81 (71%), Gaps = 3/81 (3%)
 Frame = -1

Query: 654 FRLFLNQFVVVFIIGVLGYSKSKEEHEEHLRIVLQK-REHKLYTTKGNCEFLTPEVLFLG 478
           F  +L++FVVVFI  +L +SK+KEEH EHLR+VLQK REHKLY  +  CEF   EV FLG
Sbjct: 178 FMEYLDKFVVVFIDDILVFSKTKEEHAEHLRLVLQKLREHKLYAKRSKCEFWLEEVSFLG 237

Query: 477 HVISSAAAALE--KIAVVIQW 421
           HV+S+   A++  K+  V+ W
Sbjct: 238 HVVSNGGIAVDPSKVKDVLNW 258


>gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor]
          Length = 1484

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 44/81 (54%), Positives = 58/81 (71%), Gaps = 3/81 (3%)
 Frame = -1

Query: 654 FRLFLNQFVVVFIIGVLGYSKSKEEHEEHLRIVLQK-REHKLYTTKGNCEFLTPEVLFLG 478
           F  +L++FVVVFI  +L +SK+KEEH EHLR+VLQK REHKLY  +  CEF   EV FLG
Sbjct: 701 FMEYLDKFVVVFIDDILVFSKTKEEHAEHLRLVLQKLREHKLYAKRSKCEFWLEEVSFLG 760

Query: 477 HVISSAAAALE--KIAVVIQW 421
           HV+S+   A++  K+  V+ W
Sbjct: 761 HVVSNGGIAVDPSKVKDVLNW 781


>gb|AAV32158.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1131

 Score = 85.9 bits (211), Expect = 7e-15
 Identities = 44/81 (54%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
 Frame = -1

Query: 654 FRLFLNQFVVVFIIGVLGYSKSKEEHEEHLRIVLQK-REHKLYTTKGNCEFLTPEVLFLG 478
           F  +L++FVVVFI  +L YSK+KEEHEEHLR+ L+K REH+LY     CEF  PEV FLG
Sbjct: 658 FMEYLDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLPEVKFLG 717

Query: 477 HVISSAAAALE--KIAVVIQW 421
           HVIS+   A++   +  V+ W
Sbjct: 718 HVISAGGVAVDPSNVESVLNW 738


>gb|AAM74314.2|AC114474_6 Putative retroelement [Oryza sativa Japonica Group]
           gi|78708436|gb|ABB47411.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 1223

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 44/81 (54%), Positives = 56/81 (69%), Gaps = 3/81 (3%)
 Frame = -1

Query: 654 FRLFLNQFVVVFIIGVLGYSKSKEEHEEHLRIVLQK-REHKLYTTKGNCEFLTPEVLFLG 478
           F  +L +FVVVFI  +L YSK+KEEHEEHLR+ L+K REH+LY     CEF  PEV FLG
Sbjct: 484 FMEYLEKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLPEVKFLG 543

Query: 477 HVISSAAAALE--KIAVVIQW 421
           HVIS+   A++   +  V+ W
Sbjct: 544 HVISAGGVAVDPSNVESVLNW 564


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