BLASTX nr result

ID: Papaver22_contig00029297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00029297
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629127.1| F-box family protein [Medicago truncatula] g...    67   2e-09
ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
gb|AAT38720.1| Putative F-Box protein, identical [Solanum demissum]    61   8e-08
ref|XP_002525780.1| ubiquitin-protein ligase, putative [Ricinus ...    59   3e-07
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>ref|XP_003629127.1| F-box family protein [Medicago truncatula]
           gi|355523149|gb|AET03603.1| F-box family protein
           [Medicago truncatula]
          Length = 234

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
 Frame = -3

Query: 362 PSKAYYHYHDLLGSSNGLICFSFCFRAGLESGYYVQTDYFGILNPLTKEFKQFRKNVCGY 183
           PSK Y+++   +GS NG++C   C  AG  S          + NP  ++FK+        
Sbjct: 120 PSKYYFYF---VGSCNGILCLLACDYAGFVS--------IRLWNPSIRKFKELPYLQKQE 168

Query: 182 DVTYGFGYDSSIDDYKLVMI--SNYDGDCCYKIDVYTVKSDSWSSIQ--GMGKFSFRG 21
            V YGFGYD+  ++YK+V++  + Y     ++++VYT+ +DSW S+Q   M  F F+G
Sbjct: 169 GVMYGFGYDAVTNNYKVVVVLRACYSSGNSFEVNVYTLSTDSWKSLQIYIMPSFKFQG 226


>ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|222859971|gb|EEE97518.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/124 (29%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
 Frame = -3

Query: 380 INYPFEPSKAYYHYHDLLGSSNGLICFSFCFRAGLESGYYVQTDYFGILNPLTKEFKQFR 201
           +++PF+ S++Y+H   ++GSSNGLIC +  F++ + S        F + NPL +++   +
Sbjct: 87  LHFPFKSSESYFH---VIGSSNGLICLANIFQSLIVS--------FILWNPLIQKYMIVK 135

Query: 200 KNVCGYDVTY-GFGYDSSIDDYKLVMI-----SNYDGDCCYKIDVYTVKSDSWSSIQGMG 39
             + G   ++ GFGYDS  +DYKL+ +     S +  +   +I +Y++   SW  I+  G
Sbjct: 136 PRILGPVYSFVGFGYDSRANDYKLIRMVSFQKSKFRSENFPEIALYSLNEGSWRGIRQTG 195

Query: 38  KFSF 27
              +
Sbjct: 196 PLRY 199


>gb|AAT38720.1| Putative F-Box protein, identical [Solanum demissum]
          Length = 372

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
 Frame = -3

Query: 341 YHDLLGSSNGLICFSFCFRAGLESGYYVQTDYFGILNPLTKEFKQFR------KNVCGYD 180
           Y  ++GS NGLIC             Y + +   + NP  K+ K+        +N C Y 
Sbjct: 103 YTWIVGSVNGLICL------------YSKIEETVLWNPAVKKSKKLPTLGAKLRNGCSYY 150

Query: 179 VTYGFGYDSSIDDYKLVMIS---NYDGDCCYKIDVYTVKSDSWSSI 51
           + YGFGYD + DDYK+V+I       G C   +++Y++K+DSW +I
Sbjct: 151 LKYGFGYDETRDDYKVVVIQCIYEDSGSCDSVVNIYSLKADSWRTI 196


>ref|XP_002525780.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534930|gb|EEF36616.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 351

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
 Frame = -3

Query: 380 INYPFEPSKAYYHYHDLLGSSNGLICFSFCFRAGLESGYYVQTDYFGILNPLTKEFKQF- 204
           +++P++    YYH   + GS NGLIC     R     G   + D + + NP T +FK   
Sbjct: 79  LDHPWDGDLEYYHDFYVHGSCNGLICLDIHERLNFY-GLCNRRDLY-LWNPTTNDFKALP 136

Query: 203 -RKNVCGYDVTYGFGYDSSIDDYKLVMISNYDGDCCYK----IDVYTVKSDSW--SSIQG 45
              ++       GFGYD+SIDDYK+V+I      C  K    I ++T+K++SW    IQ 
Sbjct: 137 TTSDISIMFNNVGFGYDNSIDDYKVVVIDR--STCELKRTRYIMIFTLKTNSWRRKEIQD 194

Query: 44  MGKFSFRGGKG 12
           +     + GKG
Sbjct: 195 VKCSRIQSGKG 205


>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
 Frame = -3

Query: 368 FEPSKAYYHYHDLLGSSNGLICFSFCFRAGLESGYYVQTDYFGILNPLTKEFKQFR-KNV 192
           F  S   Y Y ++LGS NGL+C           G         I NP T+E ++      
Sbjct: 92  FPVSYPEYSYIEILGSCNGLVC-----------GLIHDNPLIYIWNPSTRESRELAIPGS 140

Query: 191 CGYDVTYGFGYDSSIDDYKLVMIS------NYDG-DCCYKIDVYTVKSDSWSSIQGM 42
              D  YGFGYD  +DDYK+V +S      + DG +   K++V+T+KS+ W +IQ +
Sbjct: 141 SEDDAFYGFGYDVKLDDYKIVRVSISTSTNSTDGSNSETKVEVFTLKSNIWRTIQDL 197


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