BLASTX nr result
ID: Papaver22_contig00029263
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00029263
(553 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 94 4e-23
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 99 2e-21
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 94 3e-21
gb|AAC28197.1| contains similarity to reverse transcriptases [Ar... 94 3e-21
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 90 3e-21
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 94.4 bits (233), Expect(2) = 4e-23
Identities = 52/131 (39%), Positives = 77/131 (58%)
Frame = -1
Query: 532 DDCLLFLEASPQHLGKLQSILHQFSTASGQVINLQKSTIFFSNNVSPSIKNNIANILQMK 353
DD LLF A+ Q + IL+++ ASGQ IN +KS + FS VS K + +L M+
Sbjct: 690 DDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRGVSCEKKEELITLLHMR 749
Query: 352 IMGLGEKYLGIPLLIHRSKTKNCQPILDNMNSRLQGWISKLINQAGKTTQLNSVLRTMGM 173
+ +KYLGIP L RSK + +LD M +L+GW KL+++AGK + +V++ +
Sbjct: 750 QVDRHQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPT 809
Query: 172 YHMQLLKLPDA 140
Y M + KLP A
Sbjct: 810 YLMGVYKLPVA 820
Score = 38.9 bits (89), Expect(2) = 4e-23
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -3
Query: 137 IRQMDQLQRNYWWSGSSNHTKKYFISWNKVGFPIRHGGLGLKQLS 3
I+++ +WW G + K +++SW K+ P GG+G K L+
Sbjct: 822 IQEIHSAMARFWWGGKGDERKMHWLSWEKMCKPKCMGGMGFKDLA 866
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 98.6 bits (244), Expect(2) = 2e-21
Identities = 54/129 (41%), Positives = 77/129 (59%)
Frame = -1
Query: 532 DDCLLFLEASPQHLGKLQSILHQFSTASGQVINLQKSTIFFSNNVSPSIKNNIANILQMK 353
DD LLF A+ Q + IL+Q+ ASGQ IN +KS + +S VS S K+ + NIL M+
Sbjct: 687 DDSLLFTRANRQECTIIVDILNQYELASGQKINYEKSEVSYSRGVSVSQKDELTNILNMR 746
Query: 352 IMGLGEKYLGIPLLIHRSKTKNCQPILDNMNSRLQGWISKLINQAGKTTQLNSVLRTMGM 173
+ EKYLGIP + RSK ++D + +LQGW KL+++AGK L SV++ +
Sbjct: 747 QVDRHEKYLGIPSISGRSKKAIFDSLIDRIWKKLQGWKEKLLSRAGKEVLLKSVIQAIPT 806
Query: 172 YHMQLLKLP 146
Y M + K P
Sbjct: 807 YLMGVYKFP 815
Score = 28.9 bits (63), Expect(2) = 2e-21
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = -3
Query: 137 IRQMDQLQRNYWWSGSSNHTKKYFISWNKVGFPIRHGGLGLKQLS 3
I+++ +WW S K ++ +W+ + GG+G K L+
Sbjct: 819 IQKIQSAMARFWWGSSDTQRKIHWKNWDSMCNLKCFGGMGFKDLT 863
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 93.6 bits (231), Expect(2) = 3e-21
Identities = 48/131 (36%), Positives = 72/131 (54%)
Frame = -1
Query: 532 DDCLLFLEASPQHLGKLQSILHQFSTASGQVINLQKSTIFFSNNVSPSIKNNIANILQMK 353
DD + F ++ P+ KL IL ++ ASGQ IN KS++ FS+ S+K + IL+++
Sbjct: 578 DDTMFFSKSDPESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTPRSVKGQVKRILKIR 637
Query: 352 IMGLGEKYLGIPLLIHRSKTKNCQPILDNMNSRLQGWISKLINQAGKTTQLNSVLRTMGM 173
G KYLG+P R K I+D + + W S+ ++QAGK L +VL +M +
Sbjct: 638 KEGGTGKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRFLSQAGKQVMLKAVLASMPL 697
Query: 172 YHMQLLKLPDA 140
Y M KLP A
Sbjct: 698 YSMSCFKLPSA 708
Score = 33.5 bits (75), Expect(2) = 3e-21
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -3
Query: 134 RQMDQLQRNYWWSGSSNHTKKYFISWNKVGFPIRHGGLGLKQL 6
R++ L +WW + K +++W+K+ P GGLG + +
Sbjct: 711 RKIQSLLTRFWWDTKPDVRKTSWVAWSKLTNPKNAGGLGFRDI 753
>gb|AAC28197.1| contains similarity to reverse transcriptases [Arabidopsis thaliana]
gi|7267156|emb|CAB77868.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1077
Score = 93.6 bits (231), Expect(2) = 3e-21
Identities = 51/129 (39%), Positives = 70/129 (54%)
Frame = -1
Query: 532 DDCLLFLEASPQHLGKLQSILHQFSTASGQVINLQKSTIFFSNNVSPSIKNNIANILQMK 353
DD + F P+ KL+SILH++ ASGQ IN K +I FS P+++ + IL ++
Sbjct: 618 DDTMFFCRVDPKSCLKLKSILHKYELASGQKINQAKYSITFSAKTPPAVRERVKQILLIQ 677
Query: 352 IMGLGEKYLGIPLLIHRSKTKNCQPILDNMNSRLQGWISKLINQAGKTTQLNSVLRTMGM 173
G KYLG+P L R K I+D + R W S+ ++ AGK T L SVL TM
Sbjct: 678 KEGGQGKYLGLPELFGRKKKDLFTAIVDRIKQRALSWSSRFLSSAGKLTMLKSVLSTMPT 737
Query: 172 YHMQLLKLP 146
Y M +LP
Sbjct: 738 YTMSCFQLP 746
Score = 33.5 bits (75), Expect(2) = 3e-21
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 107 YWWSGSSNHTKKYFISWNKVGFPIRHGGLGLKQL 6
+WW + K +ISW K+ + GGLG + +
Sbjct: 760 FWWDSKPDQRKMSWISWQKMTLSFKSGGLGFRDV 793
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 90.1 bits (222), Expect(2) = 3e-21
Identities = 47/129 (36%), Positives = 74/129 (57%)
Frame = -1
Query: 532 DDCLLFLEASPQHLGKLQSILHQFSTASGQVINLQKSTIFFSNNVSPSIKNNIANILQMK 353
DD +LF +AS Q + I+ ++ ASGQ +NL K+ + FS +V ++ I N+L +K
Sbjct: 686 DDSILFTKASVQECSMVADIISKYERASGQQVNLSKTEVVFSRSVDRERRSAIVNVLGVK 745
Query: 352 IMGLGEKYLGIPLLIHRSKTKNCQPILDNMNSRLQGWISKLINQAGKTTQLNSVLRTMGM 173
+ EKYLG+P +I RSK I + + +LQGW KL+++ GK + SV + +
Sbjct: 746 EVDRQEKYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPT 805
Query: 172 YHMQLLKLP 146
Y M + LP
Sbjct: 806 YMMSVFSLP 814
Score = 36.6 bits (83), Expect(2) = 3e-21
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 137 IRQMDQLQRNYWWSGSSNHTKKYFISWNKVGFPIRHGGLGLKQL 6
I ++ L +WW S + K ++ SW+ + +P GGLG + L
Sbjct: 818 IDEIHSLLARFWWGSSDTNRKMHWHSWDTLCYPKSMGGLGFRDL 861