BLASTX nr result

ID: Papaver22_contig00029194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00029194
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    71   8e-11
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia...    68   9e-10
ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    68   9e-10
ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002888725.1| F-box family protein [Arabidopsis lyrata sub...    61   1e-07

>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 6/145 (4%)
 Frame = +3

Query: 27  SQEDPFIVPMSLCTCVSLISLEI------GVTPSICFPKFSFPKLKRLALKGVQFSNECW 188
           S+   F++P S     SL  L+I       V   ICFP      LK L+   V F+NE  
Sbjct: 134 SENSRFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFPS-----LKILSFAHVTFTNEKS 188

Query: 189 NEKLFSKCPVLEGLILGHCTYGARNFYISSDTLKFLDIFQWEDEDSLRDCALKLHAPNLV 368
            ++LFS CPVL+ L    C +   N  ++  TLK LDIF          C  K+ A NL+
Sbjct: 189 AQRLFSGCPVLQDLSFEKCYWVNINISVAIPTLKKLDIFFRSSSLDRNSCMFKIDAVNLL 248

Query: 369 YLNYWGKVAKEFVLPNSPKLVDAHV 443
            L+Y         L NS  +VDA++
Sbjct: 249 SLSYKSNPTINCFLVNSTSIVDANI 273


>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 443

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
 Frame = +3

Query: 24  ISQEDPFIVPMSLCTCVSLISLEI--GVTPSICFPKFSFPKLKRLALKGVQFSNECWN-E 194
           ++ E  F++P  +  C +L+ L++  G+ P+I       PKLK L ++   F        
Sbjct: 121 LNLESEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLT 180

Query: 195 KLFSKCPVLEGLILGHCTYGARNFY-ISSDTLKFLDIFQWEDEDSLRDCALKLHAPNLVY 371
           KL S CP+LE L+L   ++   +F  +S  TLK L  F W++ D      L L  PNLVY
Sbjct: 181 KLLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRLR-FSWQERDEFPKSVL-LDTPNLVY 238

Query: 372 LNYWGKVAKEFVLPNSPKLVDAHV 443
           L +   VA ++   N   LV+AH+
Sbjct: 239 LKFTDTVAGKYPKVNLDSLVEAHI 262


>ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g14103
           gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis
           thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat
           protein [Arabidopsis thaliana]
          Length = 381

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
 Frame = +3

Query: 24  ISQEDPFIVPMSLCTCVSLISLEI--GVTPSICFPKFSFPKLKRLALKGVQFSNECWN-E 194
           ++ E  F++P  +  C +L+ L++  G+ P+I       PKLK L ++   F        
Sbjct: 121 LNLESEFLLPSQVYLCKTLVWLKLRFGLYPTIDVEDVHLPKLKTLYIEATHFEEHGVGLT 180

Query: 195 KLFSKCPVLEGLILGHCTYGARNFY-ISSDTLKFLDIFQWEDEDSLRDCALKLHAPNLVY 371
           KL S CP+LE L+L   ++   +F  +S  TLK L  F W++ D      L L  PNLVY
Sbjct: 181 KLLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRLR-FSWQERDEFPKSVL-LDTPNLVY 238

Query: 372 LNYWGKVAKEFVLPNSPKLVDAHV 443
           L +   VA ++   N   LV+AH+
Sbjct: 239 LKFTDTVAGKYPKVNLDSLVEAHI 262


>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 46/144 (31%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
 Frame = +3

Query: 39  PFIVPMSLCTCVSLISLEIGVTPSICFPK-FSFPKLKRLALKGVQFSNECWNEKLFSKCP 215
           P ++P     C SL SL++ +   I  PK    P LK L L G Q     ++ K+FS CP
Sbjct: 138 PIVLPRCFFNCESLRSLKLRIDGGIALPKSLGLPSLKTLHLGGAQN----FDGKIFSSCP 193

Query: 216 VLEGLILGH-CTYGARNFYISSDTLKFLDIFQWEDEDSLRDCALKLHAPNLVYLNYWGKV 392
            LE L +   C     NF I +  LK L+I  W     +R C + L AP L    + G  
Sbjct: 194 NLENLTIEDICLNTIENFNIHALNLKSLEILNWRYSRIMRGCKVMLFAPKLTSFKFDGNT 253

Query: 393 AKEFVLPNSPKLVDAHVYFLKEYF 464
              +   N   L D +V   + Y+
Sbjct: 254 PLFWSEVNLTSLDDVNVVLQRYYY 277


>ref|XP_002888725.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334566|gb|EFH64984.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 428

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
 Frame = +3

Query: 48  VPMSLCTCVSLISLEIGVTPSICFPKF-SFPKLKRLALKGVQFSNECWNEKLFSKCPVLE 224
           +P S+ TC SL+SL++    ++  PKF S P LK +AL   +F+++   E L +KCPVLE
Sbjct: 139 LPSSIYTCESLVSLKLCAL-TLPSPKFVSLPSLKVMALLIAKFADDLALETLITKCPVLE 197

Query: 225 GLILGHCTYG-ARNFYISSDTLKFLDIFQWEDEDSLRDCALKLHAPNLVYLNYWGKVAKE 401
            L +  C         + S +L         DE  + D  +++ AP L YL         
Sbjct: 198 SLTIERCFCDEIEVLRVRSQSLLSFTHVADSDEGVVEDLVVEIDAPKLEYLRLSDYRVAS 257

Query: 402 FVLPNSPKLVDAHV 443
           F+L    KLV+A +
Sbjct: 258 FILNKPGKLVEADI 271


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