BLASTX nr result
ID: Papaver22_contig00029033
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00029033
(495 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera] 82 1e-26
ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot... 82 1e-26
ref|XP_002275596.1| PREDICTED: DNA repair and recombination prot... 82 1e-26
ref|XP_002305447.1| chromatin remodeling complex subunit [Populu... 80 2e-25
ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Gl... 66 1e-24
>emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]
Length = 1187
Score = 82.4 bits (202), Expect(3) = 1e-26
Identities = 46/76 (60%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Frame = -1
Query: 225 SISQVQTP*KVVLYGSLSKNHVEEVFNILNFVLPEFLKLDTSKNVLRRITSGVQI-AVRK 49
S+++VQTP KVVL G+L +NHV+EVFNILN V P+FLKL++S+ V++RI S V I VRK
Sbjct: 742 SLAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLESSRAVVKRIMSKVDIMGVRK 801
Query: 48 QIKSGEADVMF*DLVE 1
Q+KS AD + DLVE
Sbjct: 802 QLKSNAADAFY-DLVE 816
Score = 48.1 bits (113), Expect(3) = 1e-26
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Frame = -3
Query: 493 VEEIPLYDLYTLKADSCKHQ*DVFKE---QKGILFLGYEQF 380
VE+IPLYD Y++KADS Q +V K+ +K ILFLGY+QF
Sbjct: 657 VEDIPLYDFYSVKADSRPQQLEVLKQWVAEKSILFLGYKQF 697
Score = 34.7 bits (78), Expect(3) = 1e-26
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -2
Query: 317 KVPTILILDEGHRPRNGTTD 258
K P ILILDEGH PRN TD
Sbjct: 719 KAPQILILDEGHTPRNENTD 738
>ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
vinifera]
Length = 903
Score = 82.4 bits (202), Expect(3) = 1e-26
Identities = 46/76 (60%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Frame = -1
Query: 225 SISQVQTP*KVVLYGSLSKNHVEEVFNILNFVLPEFLKLDTSKNVLRRITSGVQI-AVRK 49
S+++VQTP KVVL G+L +NHV+EVFNILN V P+FLKL++S+ V++RI S V I VRK
Sbjct: 516 SLAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLESSRAVVKRIMSKVDIMGVRK 575
Query: 48 QIKSGEADVMF*DLVE 1
Q+KS AD + DLVE
Sbjct: 576 QLKSNAADAFY-DLVE 590
Score = 48.1 bits (113), Expect(3) = 1e-26
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Frame = -3
Query: 493 VEEIPLYDLYTLKADSCKHQ*DVFKE---QKGILFLGYEQF 380
VE+IPLYD Y++KADS Q +V K+ +K ILFLGY+QF
Sbjct: 431 VEDIPLYDFYSVKADSRPQQLEVLKQWVAEKSILFLGYKQF 471
Score = 34.7 bits (78), Expect(3) = 1e-26
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -2
Query: 317 KVPTILILDEGHRPRNGTTD 258
K P ILILDEGH PRN TD
Sbjct: 493 KAPQILILDEGHTPRNENTD 512
>ref|XP_002275596.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
vinifera]
Length = 944
Score = 82.0 bits (201), Expect(3) = 1e-26
Identities = 45/76 (59%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Frame = -1
Query: 225 SISQVQTP*KVVLYGSLSKNHVEEVFNILNFVLPEFLKLDTSKNVLRRITSGVQI-AVRK 49
S+++VQTP KVVL G+L +NHV+EVFNILN V P+FLKL++S+ +++RI S V I VRK
Sbjct: 557 SLAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLESSRAIVKRIMSKVDIMGVRK 616
Query: 48 QIKSGEADVMF*DLVE 1
Q+KS AD + DLVE
Sbjct: 617 QLKSNAADAFY-DLVE 631
Score = 48.1 bits (113), Expect(3) = 1e-26
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Frame = -3
Query: 493 VEEIPLYDLYTLKADSCKHQ*DVFKE---QKGILFLGYEQF 380
VE+IPLYD Y++KADS Q +V K+ +K ILFLGY+QF
Sbjct: 472 VEDIPLYDFYSVKADSRPQQLEVLKQWVAEKSILFLGYKQF 512
Score = 34.7 bits (78), Expect(3) = 1e-26
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -2
Query: 317 KVPTILILDEGHRPRNGTTD 258
K P ILILDEGH PRN TD
Sbjct: 534 KAPQILILDEGHTPRNENTD 553
>ref|XP_002305447.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222848411|gb|EEE85958.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 630
Score = 79.7 bits (195), Expect(3) = 2e-25
Identities = 43/76 (56%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Frame = -1
Query: 225 SISQVQTP*KVVLYGSLSKNHVEEVFNILNFVLPEFLKLDTSKNVLRRITSGVQI-AVRK 49
S+++VQTP KVVL G+L +NH +EVFN+LN V P+FL++DTS+ +++RI S V I RK
Sbjct: 252 SLAKVQTPRKVVLSGTLYQNHAKEVFNVLNLVRPKFLRMDTSRAIVKRILSKVNIPGARK 311
Query: 48 QIKSGEADVMF*DLVE 1
Q K+G AD F DLVE
Sbjct: 312 QFKAG-ADAAFYDLVE 326
Score = 49.7 bits (117), Expect(3) = 2e-25
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = -3
Query: 493 VEEIPLYDLYTLKADSCKHQ*DVFK---EQKGILFLGYEQFXXXXXXXXXXXXXXAFHDI 323
+E+IPLYD Y++KADS + Q +V EQK ILFLGY+QF +I
Sbjct: 167 IEDIPLYDFYSVKADSRQQQLEVLNQWVEQKSILFLGYKQFSSIVCDDGKNQVSVTCQEI 226
Query: 322 LLR 314
LLR
Sbjct: 227 LLR 229
Score = 31.2 bits (69), Expect(3) = 2e-25
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2
Query: 311 PTILILDEGHRPRNGTTD 258
P+ILILDE H PRN TD
Sbjct: 231 PSILILDESHTPRNENTD 248
>ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Glycine max]
Length = 883
Score = 65.9 bits (159), Expect(3) = 1e-24
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = -1
Query: 225 SISQVQTP*KVVLYGSLSKNHVEEVFNILNFVLPEFLKLDTSKNVLRRITSGVQI 61
S+++VQT KVVL G+L +NHV EVFNILN V P+FLK++TS+ ++RRI S V I
Sbjct: 510 SLAKVQTARKVVLSGTLYQNHVREVFNILNLVRPKFLKMETSRPIVRRIHSRVHI 564
Score = 53.9 bits (128), Expect(3) = 1e-24
Identities = 28/41 (68%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Frame = -3
Query: 493 VEEIPLYDLYTLKADSCKHQ*DVFK---EQKGILFLGYEQF 380
VE+IPLYDLYT+KADS Q +V K EQK ILFLGY+QF
Sbjct: 425 VEDIPLYDLYTVKADSRSQQLEVLKQWMEQKSILFLGYKQF 465
Score = 38.5 bits (88), Expect(3) = 1e-24
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -2
Query: 317 KVPTILILDEGHRPRNGTTD 258
K+PTILILDEGH PRN TD
Sbjct: 487 KIPTILILDEGHNPRNENTD 506